RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 ACRP10323 421 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 PTPN11Q06124 597 aaPredicted RBP23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 PGM5Q15124 567 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 NFRKBQ6P4R8 1299 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 PSRC1Q6PGN9 363 aaPredicted RBP23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 NFXL1Q6ZNB6 911 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 ZNF365Q70YC5 407 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 GUCD1Q96NT3 240 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 LZTS2Q9BRK4 669 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 RGS20O76081 388 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 MYCLP12524 364 aaPredicted RBP23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 GNAQP50148 359 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 RASIP1Q5U651 963 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 RNF20Q5VTR2 975 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 PIBF1Q8WXW3 757 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 EMID1Q96A84 441 aaPredicted RBP23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 FAM161BQ96MY7 647 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 SEMA6BQ9H3T3 888 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 MRVI1Q9Y6F6 885 aa23.67■■□□□ 1.38
CHRNA3-207ENST00000559941 CALM1P0DP23 149 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 CALM2P0DP24 149 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 CALM3P0DP25 149 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 CCL23P55773 120 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 FAM47CQ5HY64 1035 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 KCNV1Q6PIU1 500 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 FCHSD1Q86WN1 690 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 IL31RAQ8NI17 732 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 RRP36Q96EU6 259 aaKnown RBP23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 WNT8AQ9H1J5 351 aa23.66■■□□□ 1.38
CHRNA3-207ENST00000559941 CYP2C9P11712 490 aa23.65■■□□□ 1.38
CHRNA3-207ENST00000559941 LAMC2Q13753 1193 aa23.65■■□□□ 1.38
CHRNA3-207ENST00000559941 SRBD1Q8N5C6 995 aaKnown RBP23.65■■□□□ 1.38
CHRNA3-207ENST00000559941 TRIP12Q14669 1992 aaPredicted RBP23.65■■□□□ 1.38
CHRNA3-207ENST00000559941 SCN5AQ14524 2016 aa23.64■■□□□ 1.38
CHRNA3-207ENST00000559941 TMEM265A0A087WTH1 108 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 CDC45O75419 566 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 PLEKHA8P1O95397 391 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 FGBP02675 491 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 CASTP20810 708 aaKnown RBP23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 CCND2P30279 289 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 DGKDQ16760 1214 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 SGMS1Q86VZ5 419 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 DHX37Q8IY37 1157 aaKnown RBP23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 PPP1R13LQ8WUF5 828 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 HERVK_113Q902F9 699 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 KAT2BQ92831 832 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 LRRC2Q9BYS8 371 aa23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 TTYH1Q9H313 450 aaPredicted RBP23.64■■□□□ 1.37
CHRNA3-207ENST00000559941 FRMPD4Q14CM0 1322 aa23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 RXRAP19793 462 aa23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 TSGA10IPQ3SY00 556 aa23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 RPUSD2Q8IZ73 545 aaKnown RBP23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 NEK1Q96PY6 1258 aa23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 SEC63Q9UGP8 760 aaKnown RBP23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 SLC12A7Q9Y666 1083 aa23.63■■□□□ 1.37
CHRNA3-207ENST00000559941 TGFB3P10600 412 aa23.62■■□□□ 1.37
CHRNA3-207ENST00000559941 MYSM1Q5VVJ2 828 aa23.62■■□□□ 1.37
CHRNA3-207ENST00000559941 SESTD1Q86VW0 696 aa23.62■■□□□ 1.37
CHRNA3-207ENST00000559941 PPTC7Q8NI37 304 aa23.62■■□□□ 1.37
CHRNA3-207ENST00000559941 SCLYQ96I15 445 aa23.62■■□□□ 1.37
CHRNA3-207ENST00000559941 CCDC136Q96JN2 1154 aa23.62■■□□□ 1.37
CHRNA3-207ENST00000559941 DNAJB2P25686 324 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 SP2Q02086 613 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 CELF3Q5SZQ8 465 aaKnown RBP23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 CMTR1Q8N1G2 835 aaKnown RBP23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 FANCBQ8NB91 859 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 SLC17A8Q8NDX2 589 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 VWCEQ96DN2 955 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 ZFP91Q96JP5 570 aaPredicted RBP23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 CDX2Q99626 313 aaPredicted RBP23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 MTIF3Q9H2K0 278 aaKnown RBP23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 GBF1Q92538 1859 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 TANC1Q9C0D5 1861 aa23.61■■□□□ 1.37
CHRNA3-207ENST00000559941 PIK3CDO00329 1044 aa23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 GGPS1O95749 300 aa23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 HOXD8P13378 290 aaPredicted RBP23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 CHMP4BP1P59074 171 aa23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 EXOSC10Q01780 885 aaKnown RBP23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 RAB11FIP4Q86YS3 637 aa23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 RASEFQ8IZ41 740 aa23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 CXXC1Q9P0U4 656 aaPredicted RBP23.6■■□□□ 1.37
CHRNA3-207ENST00000559941 GRXCR1A8MXD5 290 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 PITPNM1O00562 1244 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 MEIS2O14770 477 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 STAM2O75886 525 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 UBA1P22314 1058 aaKnown RBP23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 PSEN2P49810 448 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 MRPS9P82933 396 aaKnown RBP23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 PTGISQ16647 500 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 USP17L6PQ6QN14 398 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 SYNE3Q6ZMZ3 975 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 TMTC3Q6ZXV5 915 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 DHX32Q7L7V1 743 aaKnown RBP23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 OTOP2Q7RTS6 562 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 SMARCC2Q8TAQ2 1214 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 GPKOWQ92917 476 aaPredicted RBP eCLIP23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 CUL5Q93034 780 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 INPP4AQ96PE3 977 aaPredicted RBP23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 KATNAL1Q9BW62 490 aa23.59■■□□□ 1.37
CHRNA3-207ENST00000559941 NOD1Q9Y239 953 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms