RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 PDLIM7Q9NR12 457 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 Q9Y3F1 56 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 TRIM43BA6NCK2 446 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 CCND2P30279 289 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 VSIG10LQ86VR7 867 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 CUL5Q93034 780 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 PHKBQ93100 1093 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 TRIM43Q96BQ3 446 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 GDF15Q99988 308 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 PSTPIP2Q9H939 334 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 RTEL1Q9NZ71 1219 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 GRIN2DO15399 1336 aa17.09■□□□□ 0.33
RABGGTA-211ENST00000559850 ELP1O95163 1332 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 FRMPD4Q14CM0 1322 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 STXBP3O00186 592 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 NAPAP54920 295 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 MRPS9P82933 396 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 ARHGAP1Q07960 439 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 FBXL16Q8N461 479 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 PDRG1Q9NUG6 133 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 PRKAG2Q9UGJ0 569 aa17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-211ENST00000559850 NID2Q14112 1375 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 A0A0U1RQG5 324 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 ARVCFO00192 962 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 NKRFO15226 690 aaKnown RBP eCLIP17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 ZEB2O60315 1214 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 DTNBO60941 627 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 GH1P01241 217 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 CLTBP09497 229 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 ITGB8P26012 769 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 CPT1AP50416 773 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 CDK7P50613 346 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 RCAN1P53805 252 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 FAAP100Q0VG06 881 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 STK3Q13188 491 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 BCAS3Q9H6U6 928 aa17.07■□□□□ 0.32
RABGGTA-211ENST00000559850 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 SP2Q02086 613 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 ITGA7Q13683 1181 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 ANKRD33Q7Z3H0 272 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 BADQ92934 168 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 UBE2OQ9C0C9 1292 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 TMEM260Q9NX78 707 aa17.06■□□□□ 0.32
RABGGTA-211ENST00000559850 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 A6NJR5 290 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 DCDC2CA8MYV0 355 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 MMP3P08254 477 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 UBA1P22314 1058 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 EVCP57679 992 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 NTRK3Q16288 839 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 PKN1Q16512 942 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 FAM126BQ8IXS8 530 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 SCN10AQ9Y5Y9 1956 aa17.05■□□□□ 0.32
RABGGTA-211ENST00000559850 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 CABYRO75952 493 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 GGPS1O95749 300 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 SCG2P13521 617 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 ADCY7P51828 1080 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 PFKFB3Q16875 520 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 DHX37Q8IY37 1157 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 TRIOBPQ9H2D6 2365 aa17.04■□□□□ 0.32
RABGGTA-211ENST00000559850 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 KIAA0355O15063 1070 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 RAG1P15918 1043 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 BRDTQ58F21 947 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 PCNX4Q63HM2 1172 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 PPP1R18Q6NYC8 613 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 TOX2Q96NM4 488 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 PKD2L1Q9P0L9 805 aa17.03■□□□□ 0.32
RABGGTA-211ENST00000559850 MROH7Q68CQ1 1323 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 B4GALT4O60513 344 aa17.02■□□□□ 0.32
RABGGTA-211ENST00000559850 ZNF286BP0CG31 522 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms