RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 TCF20Q9UGU0 1960 aaKnown RBP21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 SGSM2O43147 1006 aa21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 ARHGEF15O94989 841 aa21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 HOXD8P13378 290 aaPredicted RBP21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 TROAPQ12815 778 aa21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 SESTD1Q86VW0 696 aa21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 IWS1Q96ST2 819 aa21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 RIOX1Q9H6W3 641 aa21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 DDX41Q9UJV9 622 aaKnown RBP21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 MRPL11Q9Y3B7 192 aaKnown RBP21.89■■□□□ 1.09
CDC42BPB-206ENST00000559790 PITPNM1O00562 1244 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 ZBTB5O15062 677 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 GH1P01241 217 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 NR3C2P08235 984 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 PTPN11Q06124 597 aaPredicted RBP21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 FAM47CQ5HY64 1035 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 GDF6Q6KF10 455 aaPredicted RBP21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 EMID1Q96A84 441 aaPredicted RBP21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 MPHOSPH6Q99547 160 aaKnown RBP21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 PDCD2LQ9BRP1 358 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 AMNQ9BXJ7 453 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 KAT6AQ92794 2004 aa21.88■■□□□ 1.09
CDC42BPB-206ENST00000559790 FRMPD4Q14CM0 1322 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 E7EWF7 191 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 KPNA6O60684 536 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 CFBP00751 764 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 IQCF3P0C7M6 154 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 SUPT20HL2P0C7V6 817 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 HIC1Q14526 733 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 RAB30Q15771 203 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 TCTN1Q2MV58 587 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 DEFB128Q7Z7B8 93 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 MB21D2Q8IYB1 491 aaPredicted RBP21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 GPKOWQ92917 476 aaPredicted RBP eCLIP21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 WNT8BQ93098 351 aa21.87■■□□□ 1.09
CDC42BPB-206ENST00000559790 BDP1A6H8Y1 2624 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 NLRC5Q86WI3 1866 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 HAS3O00219 553 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 DHX16O60231 1041 aaKnown RBP21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 HOXA13P31271 388 aaPredicted RBP21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 RBL2Q08999 1139 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 STXBP2Q15833 593 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 TRAF7Q6Q0C0 670 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 PIGSQ96S52 555 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 GPHNQ9NQX3 736 aaPredicted RBP21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 XIRP2A4UGR9 3374 aa21.86■■□□□ 1.09
CDC42BPB-206ENST00000559790 LOXHD1Q8IVV2 1947 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 B4DLN1 442 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 F2P00734 622 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 PFKMP08237 780 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 MRPL12P52815 198 aaKnown RBP21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 PGM5Q15124 567 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 ARHGEF16Q5VV41 709 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 CHST3Q7LGC8 479 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 PCDHA11Q9Y5I1 949 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 PCDHA1Q9Y5I3 950 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 SLC4A7Q9Y6M7 1214 aa21.85■■□□□ 1.09
CDC42BPB-206ENST00000559790 EIF3JO75822 258 aaKnown RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 ZNF286BP0CG31 522 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 SP2Q02086 613 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 TRIM71Q2Q1W2 868 aaKnown RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 BRDTQ58F21 947 aaPredicted RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 SPRED2Q7Z698 418 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 RPUSD2Q8IZ73 545 aaKnown RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 IGDCC4Q8TDY8 1250 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 MAP4K1Q92918 833 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 ZFP91Q96JP5 570 aaPredicted RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 MTIF3Q9H2K0 278 aaKnown RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 BCAS3Q9H6U6 928 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 GTF2IRD1Q9UHL9 959 aa21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
CDC42BPB-206ENST00000559790 EPOPA6NHQ4 379 aa21.83■■□□□ 1.09
CDC42BPB-206ENST00000559790 ATP2A2P16615 1042 aaKnown RBP21.83■■□□□ 1.09
CDC42BPB-206ENST00000559790 HOMER1Q86YM7 354 aa21.83■■□□□ 1.09
CDC42BPB-206ENST00000559790 PPTC7Q8NI37 304 aa21.83■■□□□ 1.09
CDC42BPB-206ENST00000559790 MSRAQ9UJ68 235 aa21.83■■□□□ 1.09
CDC42BPB-206ENST00000559790 ZBBXA8MT70 800 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 IFIT3O14879 490 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 UBA1P22314 1058 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 RFC2P35250 354 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 SEMA3FQ13275 785 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 PTGISQ16647 500 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 HSDL1Q3SXM5 330 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 MYSM1Q5VVJ2 828 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 VSIG10LQ86VR7 867 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 LY9Q9HBG7 655 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 HDAC6Q9UBN7 1215 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 RBM8AQ9Y5S9 174 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 WDR81Q562E7 1941 aa21.82■■□□□ 1.08
CDC42BPB-206ENST00000559790 PSEN2P49810 448 aa21.81■■□□□ 1.08
CDC42BPB-206ENST00000559790 MBTPS1Q14703 1052 aa21.81■■□□□ 1.08
CDC42BPB-206ENST00000559790 GAS2L1Q99501 681 aaPredicted RBP21.81■■□□□ 1.08
CDC42BPB-206ENST00000559790 SLC28A3Q9HAS3 691 aa21.81■■□□□ 1.08
CDC42BPB-206ENST00000559790 MAP3K20Q9NYL2 800 aaKnown RBP21.81■■□□□ 1.08
CDC42BPB-206ENST00000559790 MRVI1Q9Y6F6 885 aa21.81■■□□□ 1.08
CDC42BPB-206ENST00000559790 NBNO60934 754 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 CA3P07451 260 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 HOXC8P31273 242 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 MRPS9P82933 396 aaKnown RBP21.8■■□□□ 1.08
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