RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 SLC28A3Q9HAS3 691 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
LRRC28-213ENST00000559399 YBX2Q9Y2T7 364 aaKnown RBP17.35■□□□□ 0.37
LRRC28-213ENST00000559399 E7EWF7 191 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 ACTN1P12814 892 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 ATP2A2P16615 1042 aaKnown RBP17.34■□□□□ 0.37
LRRC28-213ENST00000559399 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
LRRC28-213ENST00000559399 WTAPQ15007 396 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 PTGISQ16647 500 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 DGKDQ16760 1214 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 DEFB128Q7Z7B8 93 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 SESTD1Q86VW0 696 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 SAMD3Q8N6K7 520 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
LRRC28-213ENST00000559399 PDCD2LQ9BRP1 358 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 TAF6LQ9Y6J9 622 aa17.34■□□□□ 0.37
LRRC28-213ENST00000559399 IQCF3P0C7M6 154 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 HOXA13P31271 388 aaPredicted RBP17.33■□□□□ 0.36
LRRC28-213ENST00000559399 RABGGTBP53611 331 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 TROAPQ12815 778 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 LAMC2Q13753 1193 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 SLC35G1Q2M3R5 365 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 STOX1Q6ZVD7 989 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 CCDC155Q8N6L0 562 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 USP38Q8NB14 1042 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 PIGSQ96S52 555 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 RIOX1Q9H6W3 641 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 SENP2Q9HC62 589 aa17.33■□□□□ 0.36
LRRC28-213ENST00000559399 GCOM1H8Y6P7 765 aaPredicted RBP17.32■□□□□ 0.36
LRRC28-213ENST00000559399 POLR2MP0CAP2 368 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 TMEM67Q5HYA8 995 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 CATIPQ7Z7H3 387 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 CAGE1Q8TC20 777 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 KAT2BQ92831 832 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 PCDHA11Q9Y5I1 949 aa17.32■□□□□ 0.36
LRRC28-213ENST00000559399 CYTH3O43739 400 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 F2P00734 622 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
LRRC28-213ENST00000559399 PGM5Q15124 567 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 GDF6Q6KF10 455 aaPredicted RBP17.31■□□□□ 0.36
LRRC28-213ENST00000559399 KCNV1Q6PIU1 500 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 VSIG10LQ86VR7 867 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
LRRC28-213ENST00000559399 C7orf31Q8N865 590 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 AFAP1L1Q8TED9 768 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
LRRC28-213ENST00000559399 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
LRRC28-213ENST00000559399 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 RGS20O76081 388 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 ZNF286BP0CG31 522 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 MYOGP15173 224 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 ANTXR2P58335 489 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
LRRC28-213ENST00000559399 IL31RAQ8NI17 732 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 SPATA33Q96N06 139 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 SLC9A7Q96T83 725 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 GTF2IRD1Q9UHL9 959 aa17.3■□□□□ 0.36
LRRC28-213ENST00000559399 RBM8AQ9Y5S9 174 aaKnown RBP17.3■□□□□ 0.36
LRRC28-213ENST00000559399 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
LRRC28-213ENST00000559399 CCND2P30279 289 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 PSEN2P49810 448 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 MFSD10Q14728 455 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 CELF3Q5SZQ8 465 aaKnown RBP17.29■□□□□ 0.36
LRRC28-213ENST00000559399 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 PHOSPHO2Q8TCD6 241 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 IGDCC4Q8TDY8 1250 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 HDAC6Q9UBN7 1215 aa17.29■□□□□ 0.36
LRRC28-213ENST00000559399 SCN10AQ9Y5Y9 1956 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 PPFIA4O75335 1185 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 DDAH1O94760 285 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 GGPS1O95749 300 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 TGFB3P10600 412 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 SELPP16109 830 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
LRRC28-213ENST00000559399 IGFBP4P22692 258 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 KIF5BP33176 963 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 RBL2Q08999 1139 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 LRRC8DQ7L1W4 858 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
LRRC28-213ENST00000559399 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 DHX38Q92620 1227 aaKnown RBP17.28■□□□□ 0.36
LRRC28-213ENST00000559399 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 PRUNE2Q8WUY3 3088 aa17.28■□□□□ 0.36
LRRC28-213ENST00000559399 VCANP13611 3396 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 HAS3O00219 553 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 SORBS3O60504 671 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 PARNO95453 639 aaKnown RBP17.27■□□□□ 0.36
LRRC28-213ENST00000559399 CA3P07451 260 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 HSDL1Q3SXM5 330 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 CASC1Q6TDU7 716 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.36
LRRC28-213ENST00000559399 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms