RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 ANKRD45Q5TZF3 282 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 CCDC62Q6P9F0 684 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 PHOSPHO2Q8TCD6 241 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 AFG1LQ8WV93 481 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 SLC9A7Q96T83 725 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 UBA5Q9GZZ9 404 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 NOD1Q9Y239 953 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 SCN5AQ14524 2016 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 SCN10AQ9Y5Y9 1956 aa10.15□□□□□ -0.78
CLPX-205ENST00000559218 NEDD4P46934 1319 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 LPXNO60711 386 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 PTPN11Q06124 597 aaPredicted RBP10.14□□□□□ -0.79
CLPX-205ENST00000559218 ARHGAP1Q07960 439 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 GRB10Q13322 594 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 PTGISQ16647 500 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 LY6KQ17RY6 165 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 AAK1Q2M2I8 961 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 TCTN1Q2MV58 587 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 GDF6Q6KF10 455 aaPredicted RBP10.14□□□□□ -0.79
CLPX-205ENST00000559218 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 MFSD6Q6ZSS7 791 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 SEPT14Q6ZU15 432 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 CHST3Q7LGC8 479 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 DNERQ8NFT8 737 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 DHX38Q92620 1227 aaKnown RBP10.14□□□□□ -0.79
CLPX-205ENST00000559218 KAT2BQ92831 832 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 TAAR1Q96RJ0 339 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 MPHOSPH6Q99547 160 aaKnown RBP10.14□□□□□ -0.79
CLPX-205ENST00000559218 ZKSCAN3Q9BRR0 538 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 COL20A1Q9P218 1284 aa10.14□□□□□ -0.79
CLPX-205ENST00000559218 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
CLPX-205ENST00000559218 TCF20Q9UGU0 1960 aaKnown RBP10.14□□□□□ -0.79
CLPX-205ENST00000559218 TET1Q8NFU7 2136 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 MMP3P08254 477 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 WDR5P61964 334 aaKnown RBP10.13□□□□□ -0.79
CLPX-205ENST00000559218 DEFB103AP81534 67 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
CLPX-205ENST00000559218 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 SYTL5Q8TDW5 730 aaPredicted RBP10.13□□□□□ -0.79
CLPX-205ENST00000559218 TTC14Q96N46 770 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 EPHX3Q9H6B9 360 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 PNMA2Q9UL42 364 aa10.13□□□□□ -0.79
CLPX-205ENST00000559218 ZMYM6O95789 1325 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 B4DLN1 442 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 KIF28PB7ZC32 967 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 TLL1O43897 1013 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 NBNO60934 754 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 BAIAP3O94812 1187 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 GH1P01241 217 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 SELPP16109 830 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 PLA2G5P39877 138 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 KCNJ6P48051 423 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 MRPL12P52815 198 aaKnown RBP10.12□□□□□ -0.79
CLPX-205ENST00000559218 CDC37Q16543 378 aaPredicted RBP10.12□□□□□ -0.79
CLPX-205ENST00000559218 GPATCH4Q5T3I0 446 aaKnown RBP10.12□□□□□ -0.79
CLPX-205ENST00000559218 SESTD1Q86VW0 696 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 ADGRF4Q8IZF3 695 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 NSUN6Q8TEA1 469 aaKnown RBP10.12□□□□□ -0.79
CLPX-205ENST00000559218 AFAP1L1Q8TED9 768 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 GDPD5Q8WTR4 605 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 HLA-CQ95604 372 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 C1QTNF1Q9BXJ1 281 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 MTUS1Q9ULD2 1270 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 COG5Q9UP83 839 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 MUC6Q6W4X9 2439 aa10.12□□□□□ -0.79
CLPX-205ENST00000559218 PCP11498 1178 aaKnown RBP10.11□□□□□ -0.79
CLPX-205ENST00000559218 CKBP12277 381 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
CLPX-205ENST00000559218 MBTPS1Q14703 1052 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 QRICH1Q2TAL8 776 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 LRRC8DQ7L1W4 858 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 DGKHQ86XP1 1220 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 CAGE1Q8TC20 777 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 ESR2Q92731 530 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.792e-8■■■□□ 19
CLPX-205ENST00000559218 WNT8BQ93098 351 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 CRBNQ96SW2 442 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 RMDN3Q96TC7 470 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 HDAC6Q9UBN7 1215 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 GTF2IRD1Q9UHL9 959 aa10.11□□□□□ -0.79
CLPX-205ENST00000559218 DDX41Q9UJV9 622 aaKnown RBP10.11□□□□□ -0.79
CLPX-205ENST00000559218 TRIOO75962 3097 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 ABCB11O95342 1321 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 OPLAHO14841 1288 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 SORBS3O60504 671 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 KDM4AO75164 1064 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 CXCL10P02778 98 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 ZNF286BP0CG31 522 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 EIF2AK2P19525 551 aaKnown RBP10.1□□□□□ -0.79
CLPX-205ENST00000559218 CASTP20810 708 aaKnown RBP10.1□□□□□ -0.79
CLPX-205ENST00000559218 PSEN2P49810 448 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 ZNF200P98182 395 aaPredicted RBP10.1□□□□□ -0.79
CLPX-205ENST00000559218 RBL2Q08999 1139 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 HIC1Q14526 733 aa10.1□□□□□ -0.79
CLPX-205ENST00000559218 STXBP2Q15833 593 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms