RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 CPVLQ9H3G5 476 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 MROH8Q9H579 483 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 GPCPD1Q9NPB8 672 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 FLRT1Q9NZU1 646 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 PCDHA7Q9UN72 937 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 MRPL11Q9Y3B7 192 aaKnown RBP8.72□□□□□ -1.01
LRRC28-211ENST00000558890 PFASO15067 1338 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 FRMPD2Q68DX3 1309 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-211ENST00000558890 DNAJC25-GNG10A0A024R161 153 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 KIF28PB7ZC32 967 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 TNPO2O14787 897 aaKnown RBP8.71□□□□□ -1.02
LRRC28-211ENST00000558890 RAD21O60216 631 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 PPP6R2O75170 966 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 GOLGA8HP0CJ92 632 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 HOXD10P28358 340 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 CDC25BP30305 580 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 ZNF75DP51815 510 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 TRIM32Q13049 653 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 MAP2K5Q13163 448 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 AP3B2Q13367 1082 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 ARHGEF6Q15052 776 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 QRICH1Q2TAL8 776 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 DNTTIP2Q5QJE6 756 aaKnown RBP8.71□□□□□ -1.02
LRRC28-211ENST00000558890 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 CCDC144CPQ8IYA2 1237 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 ENGASEQ8NFI3 743 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 NPLOC4Q8TAT6 608 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 PHKBQ93100 1093 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 COA7Q96BR5 231 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 FGD4Q96M96 766 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 TRIM5Q9C035 493 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 RAVER2Q9HCJ3 691 aaKnown RBP8.71□□□□□ -1.02
LRRC28-211ENST00000558890 CTDP1Q9Y5B0 961 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-211ENST00000558890 CLIC4Q9Y696 253 aa8.71□□□□□ -1.02
LRRC28-211ENST00000558890 MYH15Q9Y2K3 1946 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 STXBP3O00186 592 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 ADCY3O60266 1144 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 PPP1R11O60927 126 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 FOSP01100 380 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 PRKAR2AP13861 404 aaKnown RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 ELNP15502 786 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 CMA1P23946 247 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 GRK4P32298 578 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 RGS19P49795 217 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 MRPL12P52815 198 aaKnown RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 SNW1Q13573 536 aaKnown RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 SLC39A14Q15043 492 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 MTFR1Q15390 333 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 CCL14Q16627 93 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 ZNF792Q3KQV3 632 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 SARM1Q6SZW1 724 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 FMR1NBQ8N0W7 255 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 SPC24Q8NBT2 197 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 SH3TC2Q8TF17 1288 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 CLEC4DQ8WXI8 215 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 TRIB2Q92519 343 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 PIGSQ96S52 555 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 NUDT12Q9BQG2 462 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 PHF20Q9BVI0 1012 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 ACAD9Q9H845 621 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 BRMS1Q9HCU9 246 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 C6orf50Q9HD87 102 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 HOOK1Q9UJC3 728 aaKnown RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 CCPG1Q9ULG6 757 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 CEP131Q9UPN4 1083 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 PCDHA1Q9Y5I3 950 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 V9GY48 417 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 FRMPD4Q14CM0 1322 aa8.7□□□□□ -1.02
LRRC28-211ENST00000558890 ZNFX1Q9P2E3 1918 aaKnown RBP8.7□□□□□ -1.02
LRRC28-211ENST00000558890 PLXNA1Q9UIW2 1896 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 A0A1B0GVL5 298 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 OPLAHO14841 1288 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 CUTAO60888 179 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 MMP1P03956 469 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 PFKFB1P16118 471 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 CYP2B6P20813 491 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 ADORA2AP29274 412 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 SYKP43405 635 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 HSD17B4P51659 736 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 NDUFA8P51970 172 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 ORC2Q13416 577 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 RILPL1Q5EBL4 403 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 MUM1L1Q5H9M0 696 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 SNRNP48Q6IEG0 339 aaKnown RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 C11orf57Q6ZUT1 292 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 PLA2G4DQ86XP0 818 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 CPXCR1Q8N123 301 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 MSL3Q8N5Y2 521 aaKnown RBP8.69□□□□□ -1.02
LRRC28-211ENST00000558890 TRPV1Q8NER1 839 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 DNERQ8NFT8 737 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 SOCS4Q8WXH5 440 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 CUL5Q93034 780 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 TIGD1Q96MW7 591 aa8.69□□□□□ -1.02
LRRC28-211ENST00000558890 AIFM3Q96NN9 605 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms