RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FANCBQ8NB91 859 aa14.47□□□□□ -0.09
SMAD3-208ENST00000558827 SLC43A3Q8NBI5 491 aa14.47□□□□□ -0.09
SMAD3-208ENST00000558827 DDX41Q9UJV9 622 aaKnown RBP14.47□□□□□ -0.09
SMAD3-208ENST00000558827 NKRFO15226 690 aaKnown RBP eCLIP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 RGS20O76081 388 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 LIFRP42702 1097 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 EXOSC10Q01780 885 aaKnown RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 BRDTQ58F21 947 aaPredicted RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 MFSD5Q6N075 450 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 SYNE3Q6ZMZ3 975 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 C16orf59Q7L2K0 433 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 DHX32Q7L7V1 743 aaKnown RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 SCLYQ96I15 445 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 RNPC3Q96LT9 517 aaKnown RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 JAKMIP1Q96N16 626 aaKnown RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.098e-11■□□□□ 9.4
SMAD3-208ENST00000558827 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 ALDH8A1Q9H2A2 487 aaPredicted RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.09
SMAD3-208ENST00000558827 KIAA1217Q5T5P2 1943 aa14.46□□□□□ -0.09
SMAD3-208ENST00000558827 KLF18A0A0U1RQI7 1052 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 A6NJR5 290 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 MMP3P08254 477 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 CCND2P30279 289 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 GNAQP50148 359 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 FGD1P98174 961 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 SP2Q02086 613 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 UBE2SQ16763 222 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 VSIG10LQ86VR7 867 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 DHX37Q8IY37 1157 aaKnown RBP14.45□□□□□ -0.1
SMAD3-208ENST00000558827 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 MAP3K14Q99558 947 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 MTA3Q9BTC8 594 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 HIPK3Q9H422 1215 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 SNX14Q9Y5W7 946 aa14.45□□□□□ -0.1
SMAD3-208ENST00000558827 GRXCR1A8MXD5 290 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 PPFIA3O75145 1194 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 GGPS1O95749 300 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 ZNF286BP0CG31 522 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 CALM1P0DP23 149 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 CALM2P0DP24 149 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 CALM3P0DP25 149 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 APOBRQ0VD83 1088 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 TRAF1Q13077 416 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 ZNF365Q70YC5 407 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 HEATR3Q7Z4Q2 680 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 TMEM199Q8N511 208 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
SMAD3-208ENST00000558827 NOC4LQ9BVI4 516 aaKnown RBP14.44□□□□□ -0.1
SMAD3-208ENST00000558827 LAMA2P24043 3122 aaKnown RBP14.44□□□□□ -0.1
SMAD3-208ENST00000558827 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 GOLGA8BA8MQT2 603 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 ZBTB43O43298 467 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 MRPS9P82933 396 aaKnown RBP14.43□□□□□ -0.1
SMAD3-208ENST00000558827 SP4Q02446 784 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 GHRHRQ02643 423 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 PPIGQ13427 754 aaKnown RBP eCLIP14.43□□□□□ -0.1
SMAD3-208ENST00000558827 RTN1Q16799 776 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 TMEM240Q5SV17 173 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 FAM109BQ6ICB4 259 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-208ENST00000558827 Q6ZUG5 572 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 SGMS1Q86VZ5 419 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 KAT2BQ92831 832 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 CUL5Q93034 780 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 LARP6Q9BRS8 491 aaKnown RBP14.43□□□□□ -0.1
SMAD3-208ENST00000558827 WNT8AQ9H1J5 351 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 TELO2Q9Y4R8 837 aa14.43□□□□□ -0.1
SMAD3-208ENST00000558827 V9GY48 417 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-208ENST00000558827 MEIS2O14770 477 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 CASTP20810 708 aaKnown RBP14.42□□□□□ -0.1
SMAD3-208ENST00000558827 UBA1P22314 1058 aaKnown RBP14.42□□□□□ -0.1
SMAD3-208ENST00000558827 CDC27P30260 824 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 HSPA4P34932 840 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 KRT32Q14532 448 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 OTOP2Q7RTS6 562 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 DEFB128Q7Z7B8 93 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 PGBD1Q96JS3 809 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 SPATA33Q96N06 139 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 MAF1Q9H063 256 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 PSTPIP2Q9H939 334 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 MLXIPQ9HAP2 919 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 MTMR10Q9NXD2 777 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 PPP4R2Q9NY27 417 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 MAP3K20Q9NYL2 800 aaKnown RBP14.42□□□□□ -0.1
SMAD3-208ENST00000558827 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 NOD1Q9Y239 953 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 DOCK5Q9H7D0 1870 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 SCN10AQ9Y5Y9 1956 aa14.42□□□□□ -0.1
SMAD3-208ENST00000558827 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 KPNA6O60684 536 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 SMARCA1P28370 1054 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 ADD1P35611 737 aaKnown RBP14.41□□□□□ -0.1
SMAD3-208ENST00000558827 PSEN2P49810 448 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-208ENST00000558827 SEMA3FQ13275 785 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 LAMC2Q13753 1193 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms