RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 PPP1R13LQ8WUF5 828 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 CUL5Q93034 780 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 TOX2Q96NM4 488 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 MYH7BA7E2Y1 1941 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 GH1P01241 217 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 CCND2P30279 289 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 APOBRQ0VD83 1088 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 CCDC62Q6P9F0 684 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 FAM126BQ8IXS8 530 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 SAMD3Q8N6K7 520 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 GPKOWQ92917 476 aaPredicted RBP eCLIP17.65■□□□□ 0.42
RPL28-207ENST00000558815 KCNB2Q92953 911 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 LRCH3Q96II8 777 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 RBM28Q9NW13 759 aaKnown RBP17.65■□□□□ 0.42
RPL28-207ENST00000558815 GRIN2DO15399 1336 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 CNTNAP5Q8WYK1 1306 aa17.65■□□□□ 0.42
RPL28-207ENST00000558815 RANBP2P49792 3224 aaKnown RBP17.64■□□□□ 0.41
RPL28-207ENST00000558815 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
RPL28-207ENST00000558815 PURAQ00577 322 aaKnown RBP17.64■□□□□ 0.41
RPL28-207ENST00000558815 FAM47CQ5HY64 1035 aa17.64■□□□□ 0.41
RPL28-207ENST00000558815 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
RPL28-207ENST00000558815 AFG1LQ8WV93 481 aa17.64■□□□□ 0.41
RPL28-207ENST00000558815 BRF1Q92994 677 aa17.64■□□□□ 0.41
RPL28-207ENST00000558815 MTG1Q9BT17 334 aaPredicted RBP17.64■□□□□ 0.41
RPL28-207ENST00000558815 RPS6KB1P23443 525 aa17.63■□□□□ 0.41
RPL28-207ENST00000558815 ARHGAP1Q07960 439 aa17.63■□□□□ 0.41
RPL28-207ENST00000558815 VSIG10LQ86VR7 867 aa17.63■□□□□ 0.41
RPL28-207ENST00000558815 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
RPL28-207ENST00000558815 DDX41Q9UJV9 622 aaKnown RBP17.63■□□□□ 0.41
RPL28-207ENST00000558815 TBX21Q9UL17 535 aa17.63■□□□□ 0.41
RPL28-207ENST00000558815 A6NJR5 290 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 B4GALT4O60513 344 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 PSMA5P28066 241 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 CDC27P30260 824 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 METAP2P50579 478 aaKnown RBP eCLIP17.62■□□□□ 0.414e-6■■■■□ 26.2
RPL28-207ENST00000558815 SHHQ15465 462 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 UBE2SQ16763 222 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 C9orf50Q5SZB4 431 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 DHX37Q8IY37 1157 aaKnown RBP17.62■□□□□ 0.41
RPL28-207ENST00000558815 RTEL1Q9NZ71 1219 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 DOCK5Q9H7D0 1870 aa17.62■□□□□ 0.41
RPL28-207ENST00000558815 MEIS2O14770 477 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 KPNA6O60684 536 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 RGS20O76081 388 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 TIMP1P01033 207 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 CD4P01730 458 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 MMP3P08254 477 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 NAPAP54920 295 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 FPGSQ05932 587 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 PSTPIP2Q9H939 334 aa17.61■□□□□ 0.41
RPL28-207ENST00000558815 GGPS1O95749 300 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 CYP2C18P33260 490 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
RPL28-207ENST00000558815 EPHB4P54760 987 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 MRPS9P82933 396 aaKnown RBP17.6■□□□□ 0.41
RPL28-207ENST00000558815 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 WWC2Q6AWC2 1192 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 USP26Q9BXU7 913 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 TRMT13Q9NUP7 481 aaKnown RBP17.6■□□□□ 0.41
RPL28-207ENST00000558815 V9GY48 417 aaPredicted RBP17.6■□□□□ 0.41
RPL28-207ENST00000558815 SCN10AQ9Y5Y9 1956 aa17.6■□□□□ 0.41
RPL28-207ENST00000558815 FRMPD4Q14CM0 1322 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 UMODL1Q5DID0 1318 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 PIK3CDO00329 1044 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 UBA1P22314 1058 aaKnown RBP17.59■□□□□ 0.41
RPL28-207ENST00000558815 LAMC2Q13753 1193 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 LRIT3Q3SXY7 679 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 GNPTABQ3T906 1256 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 KCNV1Q6PIU1 500 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 ALDH8A1Q9H2A2 487 aaPredicted RBP17.59■□□□□ 0.41
RPL28-207ENST00000558815 HIPK3Q9H422 1215 aa17.59■□□□□ 0.41
RPL28-207ENST00000558815 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
RPL28-207ENST00000558815 SPDYE3A6NKU9 549 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 CYP2C9P11712 490 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 CCL23P55773 120 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 SP2Q02086 613 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 FUT2Q10981 343 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 DGKDQ16760 1214 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 CELF3Q5SZQ8 465 aaKnown RBP17.58■□□□□ 0.4
RPL28-207ENST00000558815 MFSD5Q6N075 450 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 RUFY3Q7L099 469 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
RPL28-207ENST00000558815 SPATA33Q96N06 139 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 SEZ6LQ9BYH1 1024 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
RPL28-207ENST00000558815 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
RPL28-207ENST00000558815 CCDC196A0A1B0GTZ2 297 aa17.57■□□□□ 0.4
RPL28-207ENST00000558815 EPB41L2O43491 1005 aaKnown RBP17.57■□□□□ 0.4
RPL28-207ENST00000558815 ACRP10323 421 aa17.57■□□□□ 0.4
RPL28-207ENST00000558815 CSF2RAP15509 400 aa17.57■□□□□ 0.4
RPL28-207ENST00000558815 RCAN1P53805 252 aa17.57■□□□□ 0.4
RPL28-207ENST00000558815 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
RPL28-207ENST00000558815 MYSM1Q5VVJ2 828 aa17.57■□□□□ 0.4
RPL28-207ENST00000558815 TYW1BQ6NUM6 668 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms