RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
SPG21-206ENST00000558415 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
SPG21-206ENST00000558415 UMODL1Q5DID0 1318 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 GH1P01241 217 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 CPA1P15085 419 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 BRDTQ58F21 947 aaPredicted RBP16.55■□□□□ 0.24
SPG21-206ENST00000558415 MFSD5Q6N075 450 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 APOA5Q6Q788 366 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 Q7L0L9 218 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 VSIG10LQ86VR7 867 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 CCDC82Q8N4S0 544 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 AFG1LQ8WV93 481 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 KCNB2Q92953 911 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 MTG1Q9BT17 334 aaPredicted RBP16.55■□□□□ 0.24
SPG21-206ENST00000558415 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
SPG21-206ENST00000558415 SEC63Q9UGP8 760 aaKnown RBP16.55■□□□□ 0.24
SPG21-206ENST00000558415 MRVI1Q9Y6F6 885 aa16.55■□□□□ 0.24
SPG21-206ENST00000558415 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 MMP3P08254 477 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 CYP2C18P33260 490 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 HSPA4P34932 840 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 KRT32Q14532 448 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 NBPF20Q3BBV1 942 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.24
SPG21-206ENST00000558415 SEZ6LQ9BYH1 1024 aa16.54■□□□□ 0.24
SPG21-206ENST00000558415 TRMT13Q9NUP7 481 aaKnown RBP16.54■□□□□ 0.24
SPG21-206ENST00000558415 DOCK5Q9H7D0 1870 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 SORBS3O60504 671 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 CSF2RAP15509 400 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 CCND2P30279 289 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 C16orf59Q7L2K0 433 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
SPG21-206ENST00000558415 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
SPG21-206ENST00000558415 CNTNAP5Q8WYK1 1306 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 MEIS2O14770 477 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 KPNA6O60684 536 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 SP2Q02086 613 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 FAM47CQ5HY64 1035 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 DEFB123Q8N688 67 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 KAT2BQ92831 832 aa16.52■□□□□ 0.24
SPG21-206ENST00000558415 EMID1Q96A84 441 aaPredicted RBP16.52■□□□□ 0.24
SPG21-206ENST00000558415 RNPC3Q96LT9 517 aaKnown RBP16.52■□□□□ 0.24
SPG21-206ENST00000558415 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.24
SPG21-206ENST00000558415 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.52■□□□□ 0.242e-10■■■■■ 28
SPG21-206ENST00000558415 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 PIK3CDO00329 1044 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 ZBTB43O43298 467 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 HMGB1P09429 215 aaKnown RBP16.51■□□□□ 0.23
SPG21-206ENST00000558415 ACRP10323 421 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 CYP2C9P11712 490 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 UBA1P22314 1058 aaKnown RBP16.51■□□□□ 0.23
SPG21-206ENST00000558415 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
SPG21-206ENST00000558415 FUT2Q10981 343 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 PPIGQ13427 754 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPG21-206ENST00000558415 TMEM199Q8N511 208 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 WNT8AQ9H1J5 351 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 RBM28Q9NW13 759 aaKnown RBP16.51■□□□□ 0.23
SPG21-206ENST00000558415 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
SPG21-206ENST00000558415 SCN5AQ14524 2016 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 REC8O95072 547 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 GGPS1O95749 300 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 CCL23P55773 120 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 RTN1Q16799 776 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 NFRKBQ6P4R8 1299 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
SPG21-206ENST00000558415 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 CUL5Q93034 780 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
SPG21-206ENST00000558415 TANC1Q9C0D5 1861 aa16.5■□□□□ 0.23
SPG21-206ENST00000558415 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
SPG21-206ENST00000558415 CDC27P30260 824 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 SEMA3FQ13275 785 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 DGKDQ16760 1214 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 UBE2SQ16763 222 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 CELF3Q5SZQ8 465 aaKnown RBP16.49■□□□□ 0.23
SPG21-206ENST00000558415 WWC2Q6AWC2 1192 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 KCNV1Q6PIU1 500 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 Q6ZUG5 572 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 INPP4AQ96PE3 977 aaPredicted RBP16.49■□□□□ 0.23
SPG21-206ENST00000558415 IL23AQ9NPF7 189 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 RTEL1Q9NZ71 1219 aa16.49■□□□□ 0.23
SPG21-206ENST00000558415 COL6A3P12111 3177 aa16.48■□□□□ 0.23
SPG21-206ENST00000558415 SUPT20HL2P0C7V6 817 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms