RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PASKQ96RG2 1323 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 PABPC4Q13310 644 aaKnown RBP eCLIP15.16■□□□□ 0.02
SPG11-210ENST00000558319 ABI1Q8IZP0 508 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 MAGOHBQ96A72 148 aaKnown RBP15.16■□□□□ 0.02
SPG11-210ENST00000558319 IWS1Q96ST2 819 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 ORC6Q9Y5N6 252 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 CD58P19256 250 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 SSTR3P32745 418 aaPredicted RBP15.15■□□□□ 0.02
SPG11-210ENST00000558319 DMP1Q13316 513 aaPredicted RBP15.15■□□□□ 0.02
SPG11-210ENST00000558319 IFNL3Q8IZI9 196 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 CCNYQ8ND76 341 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 FAM167BQ9BTA0 163 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 GREM2Q9H772 168 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 KLRF2D3W0D1 207 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 GRAMD1BQ3KR37 738 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 C16orf87Q6PH81 154 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 ZBTB8OSQ8IWT0 167 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 RPS8P62241 208 aaKnown RBP15.15■□□□□ 0.02
SPG11-210ENST00000558319 EVI5O60447 810 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 TOM1L1O75674 476 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 MOCS3O95396 460 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 SKIP12755 728 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 FAM178BQ8IXR5 827 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 TRIML2Q8N7C3 387 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 PSPC1Q8WXF1 523 aaKnown RBP15.15■□□□□ 0.02
SPG11-210ENST00000558319 LRFN2Q9ULH4 789 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 KIAA1024Q9UPX6 916 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
SPG11-210ENST00000558319 PDE1BQ01064 536 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 BLIDQ8IZY5 108 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 CFAP36Q96G28 342 aa15.15■□□□□ 0.02
SPG11-210ENST00000558319 NEURL1BA8MQ27 555 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 MYOCDQ8IZQ8 938 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 HAUS4Q9H6D7 363 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 NXF1Q9UBU9 619 aaKnown RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 MROH5Q6ZUA9 1318 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 GSTA4O15217 222 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 TADA3O75528 432 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 ACTN3Q08043 901 aaPredicted RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 FAM149B1Q96BN6 582 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 DRC3Q9H069 523 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 TLR7Q9NYK1 1049 aaKnown RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 CYP2D7A0A087X1C5 515 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 GNA14O95837 355 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 MAML1Q92585 1016 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 AS3MTQ9HBK9 375 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 DNAJC6O75061 913 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 XPAP23025 273 aaPredicted RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 GARSP41250 739 aaKnown RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 BAG6P46379 1132 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 GNPTABQ3T906 1256 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 FGD4Q96M96 766 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 C1orf112Q9NSG2 853 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 INO80B-WBP1J3KQ70 363 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 EPHB4P54760 987 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 ACRBPQ8NEB7 543 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 PIK3R5Q8WYR1 880 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 SYMPKQ92797 1274 aaKnown RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 COA7Q96BR5 231 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 INO80BQ9C086 356 aaPredicted RBP15.14■□□□□ 0.01
SPG11-210ENST00000558319 SEC31BQ9NQW1 1179 aa15.14■□□□□ 0.01
SPG11-210ENST00000558319 SOWAHDA6NJG2 315 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 DKC1O60832 514 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPG11-210ENST00000558319 UBE2SQ16763 222 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 HADHQ16836 314 aaKnown RBP15.13■□□□□ 0.01
SPG11-210ENST00000558319 CDO1Q16878 200 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 HACE1Q8IYU2 909 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 ST13P4Q8IZP2 240 aaPredicted RBP15.13■□□□□ 0.01
SPG11-210ENST00000558319 GOLGA8IPA6NC78 632 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 GOLGA8JA6NMD2 632 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 M0R2C6 588 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 ADPGKQ9BRR6 497 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 FTCDO95954 541 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 RSRC2Q7L4I2 434 aaKnown RBP15.13■□□□□ 0.01
SPG11-210ENST00000558319 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 SPDYE1Q8NFV5 336 aaPredicted RBP15.13■□□□□ 0.01
SPG11-210ENST00000558319 TEKT3Q9BXF9 490 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 ABCB5Q2M3G0 1257 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 SZRD1Q7Z422 152 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 HACD3Q9P035 362 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 CREB3O43889 395 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 RPN1P04843 607 aaKnown RBP15.13■□□□□ 0.01
SPG11-210ENST00000558319 APBA1Q02410 837 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 ATP6V1E2Q96A05 226 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 EIF2AQ9BY44 585 aaKnown RBP15.13■□□□□ 0.01
SPG11-210ENST00000558319 PALMDQ9NP74 551 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 ANGPTL2Q9UKU9 493 aa15.13■□□□□ 0.01
SPG11-210ENST00000558319 BTBD18B2RXH4 712 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 SRGAP2CP0DJJ0 459 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 HOXA13P31271 388 aaPredicted RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 PHKA1P46020 1223 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 ADAM9Q13443 819 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 TXLNGQ9NUQ3 528 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 CAPN11Q9UMQ6 739 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 ANGPTL3Q9Y5C1 460 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 TNKSO95271 1327 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms