RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SLC5A4Q9NY91 659 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 MAP3K20Q9NYL2 800 aaKnown RBP9.07□□□□□ -0.96
RTF1-205ENST00000558298 FLRT1Q9NZU1 646 aa9.07□□□□□ -0.96
RTF1-205ENST00000558298 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 SYNGAP1Q96PV0 1343 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 RPS6KB1P23443 525 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 ADORA2AP29274 412 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 HNRNPH2P55795 449 aaKnown RBP9.06□□□□□ -0.96
RTF1-205ENST00000558298 COL9A3Q14050 684 aaPredicted RBP9.06□□□□□ -0.96
RTF1-205ENST00000558298 KCTD2Q14681 263 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 ZSCAN26Q16670 478 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 RUFY3Q7L099 469 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 LRRC8AQ8IWT6 810 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 CCAR1Q8IX12 1150 aaKnown RBP9.06□□□□□ -0.96
RTF1-205ENST00000558298 FBXO18Q8NFZ0 1043 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 NPLOC4Q8TAT6 608 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 TSC1Q92574 1164 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 RNF208Q9H0X6 261 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 RBM28Q9NW13 759 aaKnown RBP9.06□□□□□ -0.96
RTF1-205ENST00000558298 RIPK3Q9Y572 518 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 SLC12A7Q9Y666 1083 aa9.06□□□□□ -0.96
RTF1-205ENST00000558298 ABCB11O95342 1321 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 A6NNZ2 444 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 KLRF2D3W0D1 207 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 hCG_1984214I3L0E3 225 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 ZBTB5O15062 677 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 CYTH3O43739 400 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 COBLO75128 1261 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 GADD45BO75293 160 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 PNMA6AP0CW24 399 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 CYBAP13498 195 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 PRKAR2AP13861 404 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 CYP2B6P20813 491 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 SYT1P21579 422 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 MAGEA9P43362 315 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 ZNF165P49910 485 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 SNW1Q13573 536 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 CDC37Q16543 378 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 STX1AQ16623 288 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 ZNF792Q3KQV3 632 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 TUBB8Q3ZCM7 444 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 LHX8Q68G74 356 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 TTBK2Q6IQ55 1244 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 FBXO38Q6PIJ6 1188 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 TMTC3Q6ZXV5 915 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 NCAPG2Q86XI2 1143 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 SUGP1Q8IWZ8 645 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 ADGRF4Q8IZF3 695 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 FAM177A1Q8N128 213 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 CCAR2Q8N163 923 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 ZNF713Q8N859 430 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 FAM133AQ8N9E0 248 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 CTCFLQ8NI51 663 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 MORC4Q8TE76 937 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 JAKMIP1Q96N16 626 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 MMP19Q99542 508 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 GBP3Q9H0R5 595 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 CLSTN2Q9H4D0 955 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 JMJD4Q9H9V9 463 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 A1CFQ9NQ94 594 aaKnown RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 RNF146Q9NTX7 359 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 RSPH14Q9UHP6 348 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 DNAI1Q9UI46 699 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 CFAP45Q9UL16 551 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 ZNF215Q9UL58 517 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 KIAA1217Q5T5P2 1943 aa9.05□□□□□ -0.96
RTF1-205ENST00000558298 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
RTF1-205ENST00000558298 CCDC196A0A1B0GTZ2 297 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 CCDC69A6NI79 296 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 VGLL3A8MV65 326 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 BECN2A8MW95 431 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 RAD21O60216 631 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 MSCO60682 206 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 ERLIN1O75477 346 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 SKILP12757 684 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 CASTP20810 708 aaKnown RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 FUT2Q10981 343 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 IKQ13123 557 aaPredicted RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 SLC35G1Q2M3R5 365 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 TTC31Q49AM3 519 aaPredicted RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 PRPF38BQ5VTL8 546 aaKnown RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 CHST3Q7LGC8 479 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 ANKLE1Q8NAG6 615 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 FANCBQ8NB91 859 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 SPC24Q8NBT2 197 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 TRPV1Q8NER1 839 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 DNERQ8NFT8 737 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 CLEC4DQ8WXI8 215 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 ERCC4Q92889 916 aaPredicted RBP9.04□□□□□ -0.96
RTF1-205ENST00000558298 MAML3Q96JK9 1138 aa9.04□□□□□ -0.96
RTF1-205ENST00000558298 FGD4Q96M96 766 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms