RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CRYGNQ8WXF5 182 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 NAP1L4Q99733 375 aaKnown RBP11.94□□□□□ -0.5
LRRC28-204ENST00000558172 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 HMX1Q9NP08 348 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-204ENST00000558172 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 KIAA0100Q14667 2235 aaKnown RBP11.93□□□□□ -0.5
LRRC28-204ENST00000558172 RBM47A0AV96 593 aaKnown RBP11.93□□□□□ -0.5
LRRC28-204ENST00000558172 MSCO60682 206 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 ZNF865P0CJ78 1059 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-204ENST00000558172 CYBAP13498 195 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 CAPN2P17655 700 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 ZNF76P36508 570 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
LRRC28-204ENST00000558172 ARHGAP4P98171 946 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 TRIM32Q13049 653 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 NR5A1Q13285 461 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 IQSEC1Q6DN90 963 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 PIK3AP1Q6ZUJ8 805 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 SCFD2Q8WU76 684 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 TNFRSF25Q93038 417 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 ZNF333Q96JL9 665 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 CDHR1Q96JP9 859 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 ZHX1Q9UKY1 873 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-204ENST00000558172 FAM184BQ9ULE4 1060 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 RBM19Q9Y4C8 960 aaKnown RBP11.93□□□□□ -0.5
LRRC28-204ENST00000558172 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
LRRC28-204ENST00000558172 SEPT4O43236 478 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 STX6O43752 255 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 TGFB3P10600 412 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 AKR1A1P14550 325 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 CNGA1P29973 690 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 ICAM3P32942 547 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 CIITAP33076 1130 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 INF2Q27J81 1249 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 CEP55Q53EZ4 464 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 MCTP1Q6DN14 999 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 TAPT1Q6NXT6 567 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 NIPA1Q7RTP0 329 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 FBXO16Q8IX29 292 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-204ENST00000558172 GPRASP2Q96D09 838 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 INPP4AQ96PE3 977 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-204ENST00000558172 MXRA8Q9BRK3 442 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 JADE2Q9NQC1 790 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 UBIAD1Q9Y5Z9 338 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 MYH15Q9Y2K3 1946 aa11.92□□□□□ -0.5
LRRC28-204ENST00000558172 DOCK5Q9H7D0 1870 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 CYP3A7-CYP3A51PA0A087WV96 503 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 MEIS1O00470 390 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 FIBPO43427 364 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 CYP3A7P24462 503 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 CCND3P30281 292 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 SETQ01105 290 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 TNFAIP2Q03169 654 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 COL13A1Q5TAT6 717 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 PPP4R3AQ6IN85 833 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 SEPT14Q6ZU15 432 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 BRAPQ7Z569 592 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 WDR11Q9BZH6 1224 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 ZSCAN16Q9H4T2 348 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 RTEL1Q9NZ71 1219 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 NOL7Q9UMY1 257 aaKnown RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 Q9Y3F1 56 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 MRVI1Q9Y6F6 885 aa11.91□□□□□ -0.5
LRRC28-204ENST00000558172 DDX49Q9Y6V7 483 aaKnown RBP11.91□□□□□ -0.5
LRRC28-204ENST00000558172 SPATA31C2B4DYI2 1134 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 KIF28PB7ZC32 967 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 RGS20O76081 388 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 TXNP10599 105 aaKnown RBP11.9□□□□□ -0.5
LRRC28-204ENST00000558172 CCL5P13501 91 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 ITGB5P18084 799 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 ADCYAP1R1P41586 468 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 ORC2Q13416 577 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-204ENST00000558172 MTMR1Q13613 665 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 Q4G0T1 1027 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 DUSP28Q4G0W2 176 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
LRRC28-204ENST00000558172 GIMAP8Q8ND71 665 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-204ENST00000558172 MBOAT7Q96N66 472 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 SENP7Q9BQF6 1050 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 RNF208Q9H0X6 261 aa11.9□□□□□ -0.5
LRRC28-204ENST00000558172 PAK6Q9NQU5 681 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms