RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 STAT2P52630 851 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 MFAP1P55081 439 aaKnown RBP8.89□□□□□ -0.99
SPG11-205ENST00000558080 CCDC96Q2M329 555 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 RCSD1Q6JBY9 416 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 CCDC174Q6PII3 467 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 FAM160B2Q86V87 743 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 ANKRD35Q8N283 1001 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 AGBL1Q96MI9 1066 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 PRO3102Q9H379 93 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 KIAA1217Q5T5P2 1943 aa8.89□□□□□ -0.99
SPG11-205ENST00000558080 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 ZMYM6O95789 1325 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 DNAJC25-GNG10A0A024R161 153 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 PGK1P00558 417 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 TOP1P11387 765 aaKnown RBP8.88□□□□□ -0.99
SPG11-205ENST00000558080 ALAS1P13196 640 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 SLC16A2P36021 539 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 ADCYAP1R1P41586 468 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 MAGEA10P43363 369 aaPredicted RBP8.88□□□□□ -0.99
SPG11-205ENST00000558080 LRRC41Q15345 812 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 CSPP1Q1MSJ5 1256 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 AKNAD1Q5T1N1 836 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 MYSM1Q5VVJ2 828 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 TTBK2Q6IQ55 1244 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 MFSD6Q6ZSS7 791 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 CHST13Q8NET6 341 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 FERMT2Q96AC1 680 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 LENG1Q96BZ8 264 aaPredicted RBP8.88□□□□□ -0.99
SPG11-205ENST00000558080 GDF15Q99988 308 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 XPNPEP3Q9NQH7 507 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 RNF146Q9NTX7 359 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 LIMD1Q9UGP4 676 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 FBXO40Q9UH90 709 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 PRR12Q9ULL5 1215 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 CNPY2Q9Y2B0 182 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 ATP11BQ9Y2G3 1177 aa8.88□□□□□ -0.99
SPG11-205ENST00000558080 ZNF536O15090 1300 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 FRMPD2Q68DX3 1309 aaPredicted RBP8.87□□□□□ -0.99
SPG11-205ENST00000558080 HIP1O00291 1037 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 ZNF213O14771 459 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 PLA2G6O60733 806 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 LILRB3O75022 631 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 SNAI1O95863 264 aaPredicted RBP8.87□□□□□ -0.99
SPG11-205ENST00000558080 ZNF865P0CJ78 1059 aaPredicted RBP8.87□□□□□ -0.99
SPG11-205ENST00000558080 RARBP10826 455 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 FSHRP23945 695 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 NOVP48745 357 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 OAZ1P54368 228 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 RTP1P59025 263 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 CNTN2Q02246 1040 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 QPCTQ16769 361 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 SLC39A5Q6ZMH5 540 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 DCAF4Q8WV16 495 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 TRERF1Q96PN7 1200 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 ZKSCAN3Q9BRR0 538 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 ACAD9Q9H845 621 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 TCP11L1Q9NUJ3 509 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 NRBP1Q9UHY1 535 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 ZHX1Q9UKY1 873 aaPredicted RBP8.87□□□□□ -0.99
SPG11-205ENST00000558080 FAM184BQ9ULE4 1060 aa8.87□□□□□ -0.99
SPG11-205ENST00000558080 TRIP12Q14669 1992 aaPredicted RBP8.86□□□□□ -0.99
SPG11-205ENST00000558080 NEDD4P46934 1319 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 SYNGAP1Q96PV0 1343 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 AKR1A1P14550 325 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 BMP8BP34820 402 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 TKFCQ3LXA3 575 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 MUM1L1Q5H9M0 696 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 TTC22Q5TAA0 569 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 SYDE2Q5VT97 1194 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 MAMDC4Q6UXC1 1216 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 RNF180Q86T96 592 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 MSL3Q8N5Y2 521 aaKnown RBP8.86□□□□□ -0.99
SPG11-205ENST00000558080 ESR2Q92731 530 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 FGD4Q96M96 766 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 TSEN34Q9BSV6 310 aaKnown RBP8.86□□□□□ -0.99
SPG11-205ENST00000558080 UBE2OQ9C0C9 1292 aaKnown RBP8.86□□□□□ -0.99
SPG11-205ENST00000558080 RNF41Q9H4P4 317 aaPredicted RBP8.86□□□□□ -0.99
SPG11-205ENST00000558080 A1CFQ9NQ94 594 aaKnown RBP8.86□□□□□ -0.99
SPG11-205ENST00000558080 CCPG1Q9ULG6 757 aa8.86□□□□□ -0.99
SPG11-205ENST00000558080 A0A1W2PPC1 479 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 B4E1Z4 1266 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 SOX1O00570 391 aaPredicted RBP8.85□□□□□ -0.99
SPG11-205ENST00000558080 PDHBP11177 359 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 PCP11498 1178 aaKnown RBP8.85□□□□□ -0.99
SPG11-205ENST00000558080 GSPT1P15170 499 aaKnown RBP8.85□□□□□ -0.99
SPG11-205ENST00000558080 ACVR2BQ13705 512 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 TRIM60Q495X7 471 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 BTNL9Q6UXG8 535 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 NSMFQ6X4W1 530 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 ARMCX2Q7L311 632 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 CCDC144CPQ8IYA2 1237 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 TSC1Q92574 1164 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 TTC14Q96N46 770 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 DSCC1Q9BVC3 393 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 IL25Q9H293 177 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 PRKAG2Q9UGJ0 569 aa8.85□□□□□ -0.99
SPG11-205ENST00000558080 PHF24Q9UPV7 400 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms