RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 CMTR1Q8N1G2 835 aaKnown RBP18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 SAMD3Q8N6K7 520 aa18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 ZFP91Q96JP5 570 aaPredicted RBP18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 CYP2C9P11712 490 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 KIF5BP33176 963 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 LIFRP42702 1097 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 CCL23P55773 120 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 TRAF1Q13077 416 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 ZNF697Q5TEC3 545 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 FCHSD1Q86WN1 690 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 SRBD1Q8N5C6 995 aaKnown RBP18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 MRVI1Q9Y6F6 885 aa18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 BAZ2BQ9UIF8 2168 aaKnown RBP18.76■□□□□ 0.59
AC027088.1-201ENST00000557966 FRMPD4Q14CM0 1322 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 KPNA6O60684 536 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 FAM47CQ5HY64 1035 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 RASIP1Q5U651 963 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 PSRC1Q6PGN9 363 aaPredicted RBP18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 ZNF365Q70YC5 407 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 VSIG10LQ86VR7 867 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 RASEFQ8IZ41 740 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 KAT2BQ92831 832 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 GPKOWQ92917 476 aaPredicted RBP eCLIP18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 VWCEQ96DN2 955 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 TTYH1Q9H313 450 aaPredicted RBP18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 IL23AQ9NPF7 189 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 STXBP5LQ9Y2K9 1186 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 COL6A3P12111 3177 aa18.75■□□□□ 0.59
AC027088.1-201ENST00000557966 SMARCA1P28370 1054 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 ADCK5Q3MIX3 580 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 EMID1Q96A84 441 aaPredicted RBP18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 SCLYQ96I15 445 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 CCDC136Q96JN2 1154 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 TCEANC2Q96MN5 208 aa18.74■□□□□ 0.59
AC027088.1-201ENST00000557966 CDH23Q9H251 3354 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 CCND2P30279 289 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 RNF20Q5VTR2 975 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 MICU3Q86XE3 530 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 NEK1Q96PY6 1258 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 LZTS2Q9BRK4 669 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 SLC12A7Q9Y666 1083 aa18.73■□□□□ 0.59
AC027088.1-201ENST00000557966 hCG_1642624A0A1W2PR95 340 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 SORBS3O60504 671 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 SUPT20HL2P0C7V6 817 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 CALM1P0DP23 149 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 CALM2P0DP24 149 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 CALM3P0DP25 149 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 UBA1P22314 1058 aaKnown RBP18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 GNAQP50148 359 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 CHMP4BP1P59074 171 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 MRPS9P82933 396 aaKnown RBP18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 SP2Q02086 613 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 PTPN11Q06124 597 aaPredicted RBP18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 USP17L6PQ6QN14 398 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 TMTC3Q6ZXV5 915 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 SEMA6BQ9H3T3 888 aa18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 CXXC1Q9P0U4 656 aaPredicted RBP18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 SEC63Q9UGP8 760 aaKnown RBP18.72■□□□□ 0.59
AC027088.1-201ENST00000557966 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 GRXCR1A8MXD5 290 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 MEIS2O14770 477 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 GGPS1O95749 300 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 ZNF286BP0CG31 522 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 LAMC2Q13753 1193 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 HSDL1Q3SXM5 330 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 TSGA10IPQ3SY00 556 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 MYSM1Q5VVJ2 828 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 DHX37Q8IY37 1157 aaKnown RBP18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 PPTC7Q8NI37 304 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 HERVK_113Q902F9 699 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 TANC1Q9C0D5 1861 aa18.71■□□□□ 0.59
AC027088.1-201ENST00000557966 F2P00734 622 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 HOXD8P13378 290 aaPredicted RBP18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 DNAJB2P25686 324 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 SEMA3FQ13275 785 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 DGKDQ16760 1214 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 CELF3Q5SZQ8 465 aaKnown RBP18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 GDF6Q6KF10 455 aaPredicted RBP18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 SESTD1Q86VW0 696 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 FANCBQ8NB91 859 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 CDX2Q99626 313 aaPredicted RBP18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 BCAS3Q9H6U6 928 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 CNTNAP5Q8WYK1 1306 aa18.7■□□□□ 0.58
AC027088.1-201ENST00000557966 HAS3O00219 553 aa18.69■□□□□ 0.58
AC027088.1-201ENST00000557966 PIK3CDO00329 1044 aa18.69■□□□□ 0.58
AC027088.1-201ENST00000557966 FGBP02675 491 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms