RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DIS3LQ8TF46 1054 aaKnown RBP16.42■□□□□ 0.22
USP3-205ENST00000557884 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
USP3-205ENST00000557884 RTEL1Q9NZ71 1219 aa16.42■□□□□ 0.22
USP3-205ENST00000557884 RBM47A0AV96 593 aaKnown RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 DUSP11O75319 330 aaKnown RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 FARP2O94887 1054 aaPredicted RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 ARIH2O95376 493 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 SCFD2Q8WU76 684 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 WASF1Q92558 559 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 COPS5Q92905 334 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 LLPHQ9BRT6 129 aaKnown RBP16.41■□□□□ 0.22
USP3-205ENST00000557884 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
USP3-205ENST00000557884 MYADML2A6NDP7 307 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
USP3-205ENST00000557884 FOSP01100 380 aaPredicted RBP16.4■□□□□ 0.22
USP3-205ENST00000557884 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
USP3-205ENST00000557884 XBP1P17861 261 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 TTLL4Q14679 1199 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 LRRC41Q15345 812 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 LY6KQ17RY6 165 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 TLK2Q86UE8 772 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 PCDHA4Q9UN74 947 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
USP3-205ENST00000557884 MRVI1Q9Y6F6 885 aa16.4■□□□□ 0.22
USP3-205ENST00000557884 LRRC37A2A6NM11 1700 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 SORBS3O60504 671 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 RGS20O76081 388 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
USP3-205ENST00000557884 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
USP3-205ENST00000557884 NPY5RQ15761 445 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 DUSP28Q4G0W2 176 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 TEX2Q8IWB9 1127 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 ARRDC4Q8NCT1 418 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
USP3-205ENST00000557884 PHF20Q9BVI0 1012 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 AP5M1Q9H0R1 490 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 SPC25Q9HBM1 224 aa16.39■□□□□ 0.21
USP3-205ENST00000557884 MCM3APO60318 1980 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 KBTBD13C9JR72 458 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 SREBF1P36956 1147 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
USP3-205ENST00000557884 ARHGAP4P98171 946 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 BEX3Q00994 111 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 GUCY1B3Q02153 619 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 XRRA1Q6P2D8 792 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 CCDC62Q6P9F0 684 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 RNF180Q86T96 592 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 OR6J1Q8NGC5 347 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
USP3-205ENST00000557884 DNM1LO00429 736 aa16.37■□□□□ 0.21
USP3-205ENST00000557884 GJA9P57773 515 aa16.37■□□□□ 0.21
USP3-205ENST00000557884 TRIM29Q14134 588 aa16.37■□□□□ 0.21
USP3-205ENST00000557884 FSCN1Q16658 493 aaKnown RBP16.37■□□□□ 0.21
USP3-205ENST00000557884 GALNT17Q6IS24 598 aa16.37■□□□□ 0.21
USP3-205ENST00000557884 UBE2Q1Q7Z7E8 422 aa16.37■□□□□ 0.21
USP3-205ENST00000557884 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
USP3-205ENST00000557884 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
USP3-205ENST00000557884 INPP4AQ96PE3 977 aaPredicted RBP16.37■□□□□ 0.21
USP3-205ENST00000557884 UPF3AQ9H1J1 476 aaKnown RBP16.37■□□□□ 0.21
USP3-205ENST00000557884 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
USP3-205ENST00000557884 CTAGE5O15320 804 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 STAM2O75886 525 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 CAPN2P17655 700 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 ITGB5P18084 799 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 ZNF76P36508 570 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 SP2Q02086 613 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 KRT40Q6A162 431 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 PKD2L1Q9P0L9 805 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
USP3-205ENST00000557884 SPATA31C2B4DYI2 1134 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 M0R2N6 131 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 NKRFO15226 690 aaKnown RBP eCLIP16.35■□□□□ 0.216e-7■■□□□ 13.1
USP3-205ENST00000557884 FIBPO43427 364 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 GH1P01241 217 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 UBA1P22314 1058 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms