RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 ERVV-1B6SEH8 477 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 F6X3S4 739 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 SSBP05455 408 aaKnown RBP eCLIP7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 MAP2K1Q02750 393 aaPredicted RBP7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 PTPN11Q06124 597 aaPredicted RBP7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 PPM1JQ5JR12 505 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 CST9Q5W186 159 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 SDE2Q6IQ49 451 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 CYP4F22Q6NT55 531 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 SEZ6L2Q6UXD5 910 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 ZNF765Q7L2R6 523 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 C12orf40Q86WS4 652 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 KIAA0825Q8IV33 1275 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 CKAP2LQ8IYA6 745 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 RBM17Q96I25 401 aaKnown RBP7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 CAPNS2Q96L46 248 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 THUMPD2Q9BTF0 503 aaKnown RBP7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 LRRC4CQ9HCJ2 640 aa7.05□□□□□ -1.28
HNRNPC-233ENST00000557768 LRRC37AA6NMS7 1700 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 KIAA1324LA8MWY0 1029 aaPredicted RBP7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 CYP26A1O43174 497 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 NTSR2O95665 410 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 NEFMP07197 916 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 FOSL1P15407 271 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 GBP2P32456 591 aaPredicted RBP7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 LIG3P49916 1009 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 EIF4A1P60842 406 aaKnown RBP7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 ERVK-24P63145 666 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 PWP1Q13610 501 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 AOC3Q16853 763 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 NIM1KQ8IY84 436 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 ZNF34Q8IZ26 560 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 ISL2Q96A47 359 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 SEC16BQ96JE7 1060 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 CRAMP1Q96RY5 1269 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 PCOLCE2Q9UKZ9 415 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 PCDHB5Q9Y5E4 795 aa7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 IBTKQ9P2D0 1353 aaPredicted RBP7.04□□□□□ -1.28
HNRNPC-233ENST00000557768 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 PPIP5K2O43314 1243 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 ECE1P42892 770 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 CYP27A1Q02318 531 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 SEPT6Q14141 434 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 CPSF6Q16630 551 aaKnown RBP eCLIP7.03□□□□□ -1.283e-7■■■□□ 15.6
HNRNPC-233ENST00000557768 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 USP50Q70EL3 339 aaPredicted RBP7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 RNF214Q8ND24 703 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 RASGRP4Q8TDF6 673 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 PNISRQ8TF01 805 aaKnown RBP7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 ELMO3Q96BJ8 720 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 GPR101Q96P66 508 aaPredicted RBP7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 GLIS2Q9BZE0 524 aaPredicted RBP7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 GPRC5DQ9NZD1 345 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 ADAMTS1Q9UHI8 967 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 ATP6V0A2Q9Y487 856 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 DUOX1Q9NRD9 1551 aa7.03□□□□□ -1.28
HNRNPC-233ENST00000557768 ABCC4O15439 1325 aa7.02□□□□□ -1.28
HNRNPC-233ENST00000557768 SPEF2Q9C093 1822 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 ANXA1P04083 346 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 FAM87AP0C7U9 286 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 TFE3P19532 575 aaPredicted RBP7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 NASPP49321 788 aaPredicted RBP7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 CDK8P49336 464 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 GMPSP49915 693 aaPredicted RBP7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 CXCL9Q07325 125 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 NFE2L2Q16236 605 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 OGFOD3Q6PK18 319 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 PPP1R42Q7Z4L9 355 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 MRFAP1L1Q96HT8 127 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 PLEKHF1Q96S99 279 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 TMX4Q9H1E5 349 aaPredicted RBP7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 ADARB2Q9NS39 739 aaKnown RBP7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 COL4A1P02462 1669 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 SCN9AQ15858 1988 aa7.02□□□□□ -1.29
HNRNPC-233ENST00000557768 PSME4Q14997 1843 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 SHTN1A0MZ66 631 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 ADAMTS4O75173 837 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 RAD17O75943 681 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 CELF2O95319 508 aaKnown RBP7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 EIF2S2P20042 333 aaKnown RBP7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 SPINK2P20155 84 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 NTF4P34130 210 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 EIF4A3P38919 411 aaKnown RBP7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 RPS26P62854 115 aaKnown RBP7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 INPP5AQ14642 412 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 PROSER3Q2NL68 480 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 CYP27C1Q4G0S4 372 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 SLC10A5Q5PT55 438 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 ZNF746Q6NUN9 644 aaPredicted RBP7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 LRFN4Q6PJG9 635 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 DPP8Q6V1X1 898 aaPredicted RBP7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 AGMOQ6ZNB7 445 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
HNRNPC-233ENST00000557768 UTP14AQ9BVJ6 771 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms