RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 GH1P01241 217 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 CKBP12277 381 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 KCNJ6P48051 423 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 TRAF7Q6Q0C0 670 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 TTC14Q96N46 770 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 MPHOSPH6Q99547 160 aaKnown RBP13.58□□□□□ -0.24
LGMN-219ENST00000557725 LNPKQ9C0E8 428 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
LGMN-219ENST00000557725 SIP14410 1827 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 B4E1Z4 1266 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 KDM4AO75164 1064 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 BAIAP3O94812 1187 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 SELPP16109 830 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 PSEN2P49810 448 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
LGMN-219ENST00000557725 MBTPS1Q14703 1052 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 AAK1Q2M2I8 961 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 CAGE1Q8TC20 777 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 HLA-CQ95604 372 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 LRFN3Q9BTN0 628 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 ZBED2Q9BTP6 218 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
LGMN-219ENST00000557725 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
LGMN-219ENST00000557725 DDX41Q9UJV9 622 aaKnown RBP13.57□□□□□ -0.24
LGMN-219ENST00000557725 OPLAHO14841 1288 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 STXBP2Q15833 593 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
LGMN-219ENST00000557725 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
LGMN-219ENST00000557725 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 B4GALNT3Q6L9W6 998 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 CNKSR3Q6P9H4 555 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
LGMN-219ENST00000557725 SESTD1Q86VW0 696 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 CCDC155Q8N6L0 562 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 RGS22Q8NE09 1264 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 NSUN6Q8TEA1 469 aaKnown RBP13.56□□□□□ -0.24
LGMN-219ENST00000557725 ESR2Q92731 530 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 OSBPL7Q9BZF2 842 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 JMJD4Q9H9V9 463 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 SUGCTQ9HAC7 445 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 C11orf16Q9NQ32 467 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 COG5Q9UP83 839 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 ABCB11O95342 1321 aa13.56□□□□□ -0.24
LGMN-219ENST00000557725 DOCK5Q9H7D0 1870 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 DHX16O60231 1041 aaKnown RBP13.55□□□□□ -0.24
LGMN-219ENST00000557725 PPP1R11O60927 126 aaPredicted RBP13.55□□□□□ -0.24
LGMN-219ENST00000557725 RGS20O76081 388 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 GJB5O95377 273 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 CFBP00751 764 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 CXCL10P02778 98 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 SDSP20132 328 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
LGMN-219ENST00000557725 MFSD10Q14728 455 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 DGKDQ16760 1214 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 KIAA0753Q2KHM9 967 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 ARHGEF16Q5VV41 709 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 C7orf31Q8N865 590 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 ENAHQ8N8S7 591 aaPredicted RBP13.55□□□□□ -0.24
LGMN-219ENST00000557725 IL31RAQ8NI17 732 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
LGMN-219ENST00000557725 C1QTNF1Q9BXJ1 281 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 BCAS3Q9H6U6 928 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 KAT14Q9H8E8 782 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 PXMP2Q9NR77 195 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 PNMA2Q9UL42 364 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
LGMN-219ENST00000557725 B4DLN1 442 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 HAS3O00219 553 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 ZNF213O14771 459 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 NR3C2P08235 984 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
LGMN-219ENST00000557725 HOXA13P31271 388 aaPredicted RBP13.54□□□□□ -0.24
LGMN-219ENST00000557725 MRPL12P52815 198 aaKnown RBP13.54□□□□□ -0.24
LGMN-219ENST00000557725 RBL2Q08999 1139 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 CWC27Q6UX04 472 aaKnown RBP13.54□□□□□ -0.24
LGMN-219ENST00000557725 FBXO11Q86XK2 927 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 ZSCAN10Q96SZ4 725 aaPredicted RBP13.54□□□□□ -0.24
LGMN-219ENST00000557725 C17orf80Q9BSJ5 609 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
LGMN-219ENST00000557725 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
LGMN-219ENST00000557725 F2P00734 622 aa13.53□□□□□ -0.24
LGMN-219ENST00000557725 SP2Q02086 613 aa13.53□□□□□ -0.24
LGMN-219ENST00000557725 PTK7Q13308 1070 aa13.53□□□□□ -0.24
LGMN-219ENST00000557725 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
LGMN-219ENST00000557725 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms