RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 GPNMBQ14956 572 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 ARHGEF16Q5VV41 709 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 STAG2Q8N3U4 1231 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 EXOC6Q8TAG9 804 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 EMID1Q96A84 441 aaPredicted RBP18.6■□□□□ 0.57
SCFD1-224ENST00000557713 CNNM2Q9H8M5 875 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 MUC3AQ02505 3323 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 RFXAPO00287 272 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
SCFD1-224ENST00000557713 NR3C2P08235 984 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
SCFD1-224ENST00000557713 HSD17B4P51659 736 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 SEC23AQ15436 765 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 HERC6Q8IVU3 1022 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 CCDC155Q8N6L0 562 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 AFAP1L1Q8TED9 768 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 MTMR8Q96EF0 704 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 UBAC1Q9BSL1 405 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 IL25Q9H293 177 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 PXMP2Q9NR77 195 aa18.59■□□□□ 0.57
SCFD1-224ENST00000557713 TANC1Q9C0D5 1861 aa18.58■□□□□ 0.57
SCFD1-224ENST00000557713 KLRF2D3W0D1 207 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 BAIAP3O94812 1187 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 ARHGEF15O94989 841 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 CFBP00751 764 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 RBL2Q08999 1139 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 DGKDQ16760 1214 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
SCFD1-224ENST00000557713 ADAMTS19Q8TE59 1207 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 DHX38Q92620 1227 aaKnown RBP18.58■□□□□ 0.56
SCFD1-224ENST00000557713 CERS4Q9HA82 394 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 MAP3K20Q9NYL2 800 aaKnown RBP18.58■□□□□ 0.56
SCFD1-224ENST00000557713 GTF2IRD1Q9UHL9 959 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 MAD2L2Q9UI95 211 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.56
SCFD1-224ENST00000557713 KIAA1217Q5T5P2 1943 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 MYO9BQ13459 2157 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 PALM3A6NDB9 673 aaPredicted RBP18.57■□□□□ 0.56
SCFD1-224ENST00000557713 EPOPA6NHQ4 379 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 PPP1R11O60927 126 aaPredicted RBP18.57■□□□□ 0.56
SCFD1-224ENST00000557713 RGS20O76081 388 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 SELPP16109 830 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 TAP1Q03518 808 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 STOX1Q6ZVD7 989 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 CYB5R4Q7L1T6 521 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 TSPYL2Q9H2G4 693 aaPredicted RBP18.57■□□□□ 0.56
SCFD1-224ENST00000557713 HDAC6Q9UBN7 1215 aa18.57■□□□□ 0.56
SCFD1-224ENST00000557713 TRANK1O15050 2925 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 KIF28PB7ZC32 967 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 HAS3O00219 553 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 PSEN2P49810 448 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 MICALL1Q8N3F8 863 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 C7orf31Q8N865 590 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 PPTC7Q8NI37 304 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 PDCD2LQ9BRP1 358 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 REV3LO60673 3130 aa18.56■□□□□ 0.56
SCFD1-224ENST00000557713 ZBTB5O15062 677 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 PARNO95453 639 aaKnown RBP18.55■□□□□ 0.56
SCFD1-224ENST00000557713 F2P00734 622 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 CXCL10P02778 98 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 CKBP12277 381 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 HOXD8P13378 290 aaPredicted RBP18.55■□□□□ 0.56
SCFD1-224ENST00000557713 BMP1P13497 986 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 SLC35G1Q2M3R5 365 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 MYSM1Q5VVJ2 828 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 LRRC8DQ7L1W4 858 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 VSIG10LQ86VR7 867 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
SCFD1-224ENST00000557713 SAMD3Q8N6K7 520 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 ALG1Q9BT22 464 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 KATNAL1Q9BW62 490 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 PCDHA1Q9Y5I3 950 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 TET1Q8NFU7 2136 aa18.55■□□□□ 0.56
SCFD1-224ENST00000557713 GTPBP6O43824 516 aaPredicted RBP18.54■□□□□ 0.56
SCFD1-224ENST00000557713 NBNO60934 754 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 PPFIA4O75335 1185 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 MYCLP12524 364 aaPredicted RBP18.54■□□□□ 0.56
SCFD1-224ENST00000557713 KCNJ6P48051 423 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 WDR5P61964 334 aaKnown RBP18.54■□□□□ 0.56
SCFD1-224ENST00000557713 MFSD10Q14728 455 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 KIAA0753Q2KHM9 967 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 TCTN1Q2MV58 587 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 TRIM71Q2Q1W2 868 aaKnown RBP18.54■□□□□ 0.56
SCFD1-224ENST00000557713 KCNV1Q6PIU1 500 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 TRAF7Q6Q0C0 670 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 ARNTL2Q8WYA1 636 aa18.54■□□□□ 0.56
SCFD1-224ENST00000557713 UHRF1Q96T88 793 aaPredicted RBP18.54■□□□□ 0.56
SCFD1-224ENST00000557713 TRIP12Q14669 1992 aaPredicted RBP18.53■□□□□ 0.56
SCFD1-224ENST00000557713 MYH6P13533 1939 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 TLL1O43897 1013 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 ZNF286BP0CG31 522 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 PDE4AP27815 886 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 HOXA13P31271 388 aaPredicted RBP18.53■□□□□ 0.56
SCFD1-224ENST00000557713 SP2Q02086 613 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 TFF2Q03403 129 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms