RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
RIPK3-206ENST00000557624 TDP2O95551 362 aa16.09■□□□□ 0.17
RIPK3-206ENST00000557624 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
RIPK3-206ENST00000557624 EDNRBP24530 442 aa16.09■□□□□ 0.17
RIPK3-206ENST00000557624 TOB1P50616 345 aaPredicted RBP16.09■□□□□ 0.17
RIPK3-206ENST00000557624 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
RIPK3-206ENST00000557624 STXBP2Q15833 593 aa16.09■□□□□ 0.17
RIPK3-206ENST00000557624 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
RIPK3-206ENST00000557624 VSIG10LQ86VR7 867 aa16.09■□□□□ 0.17
RIPK3-206ENST00000557624 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
RIPK3-206ENST00000557624 EDIL3O43854 480 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 CYP3A4P08684 503 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 MCM7P33993 719 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 TRAPPC10P48553 1259 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 USP11P51784 963 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 TTC38Q5R3I4 469 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 TRIB2Q92519 343 aa16.08■□□□□ 0.17
RIPK3-206ENST00000557624 KIAA1217Q5T5P2 1943 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 FAM86B1E9PN63 330 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 FAM86B2P0C5J1 330 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 ELNP15502 786 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 CYP2C19P33261 490 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 IRF5Q13568 498 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
RIPK3-206ENST00000557624 ZNF174Q15697 407 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 CEP55Q53EZ4 464 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 PRR16Q569H4 304 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 MAMDC4Q6UXC1 1216 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 FBXO16Q8IX29 292 aaPredicted RBP16.08■□□□□ 0.16
RIPK3-206ENST00000557624 CYP2W1Q8TAV3 490 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 CHAMP1Q96JM3 812 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
RIPK3-206ENST00000557624 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
RIPK3-206ENST00000557624 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 ATP6V1DQ9Y5K8 247 aa16.08■□□□□ 0.16
RIPK3-206ENST00000557624 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 ADCY3O60266 1144 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 EIF3JO75822 258 aaKnown RBP16.07■□□□□ 0.16
RIPK3-206ENST00000557624 SNAI1O95863 264 aaPredicted RBP16.07■□□□□ 0.16
RIPK3-206ENST00000557624 ITGB5P18084 799 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 PRMT2P55345 433 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 CEBPZQ03701 1054 aaKnown RBP16.07■□□□□ 0.16
RIPK3-206ENST00000557624 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
RIPK3-206ENST00000557624 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 DDX25Q9UHL0 483 aaKnown RBP16.07■□□□□ 0.16
RIPK3-206ENST00000557624 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 PTCH2Q9Y6C5 1203 aa16.07■□□□□ 0.16
RIPK3-206ENST00000557624 TCHHQ07283 1943 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 SLC37A4O43826 429 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
RIPK3-206ENST00000557624 NCLP19338 710 aaKnown RBP16.06■□□□□ 0.16
RIPK3-206ENST00000557624 CIITAP33076 1130 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
RIPK3-206ENST00000557624 PLA2G4DQ86XP0 818 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 MXRA8Q9BRK3 442 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 TFIP11Q9UBB9 837 aaKnown RBP16.06■□□□□ 0.16
RIPK3-206ENST00000557624 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
RIPK3-206ENST00000557624 UBIAD1Q9Y5Z9 338 aa16.06■□□□□ 0.16
RIPK3-206ENST00000557624 STAM2O75886 525 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 RGS20O76081 388 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 MTMR1Q13613 665 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 GNPTABQ3T906 1256 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 PRAMEF19Q5SWL8 479 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 MFSD14CQ5VZR4 134 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 PPP4R3AQ6IN85 833 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
RIPK3-206ENST00000557624 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
RIPK3-206ENST00000557624 INPP4AQ96PE3 977 aaPredicted RBP16.05■□□□□ 0.16
RIPK3-206ENST00000557624 USP28Q96RU2 1077 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 NAP1L4Q99733 375 aaKnown RBP16.05■□□□□ 0.16
RIPK3-206ENST00000557624 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 IGLV3-22A0A075B6J6 115 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 CYP3A7-CYP3A51PA0A087WV96 503 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 MEIS1O00470 390 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 NEMFO60524 1076 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 CYP3A7P24462 503 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 TRIM32Q13049 653 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
RIPK3-206ENST00000557624 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 LENG9Q96B70 501 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 JADE2Q9NQC1 790 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
RIPK3-206ENST00000557624 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
RIPK3-206ENST00000557624 HMGCRP04035 888 aa16.04■□□□□ 0.16
RIPK3-206ENST00000557624 ARP10275 920 aa16.04■□□□□ 0.16
RIPK3-206ENST00000557624 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
RIPK3-206ENST00000557624 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
RIPK3-206ENST00000557624 SF3A1Q15459 793 aaKnown RBP16.04■□□□□ 0.16
RIPK3-206ENST00000557624 Q4G0T1 1027 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms