RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 OR6J1Q8NGC5 347 aa19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 CCDC12Q8WUD4 166 aaPredicted RBP19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 ALDH8A1Q9H2A2 487 aaPredicted RBP19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 Q9Y3F1 56 aa19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 MRVI1Q9Y6F6 885 aa19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 FRMPD4Q14CM0 1322 aa19.21■□□□□ 0.67
TVP23C-CDRT4-204ENST00000557349 ALPK3Q96L96 1907 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PRPF38BQ5VTL8 546 aaKnown RBP19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 VSIG10LQ86VR7 867 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 GLT1D1Q96MS3 346 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 EHMT1Q9H9B1 1298 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 RIC8AQ9NPQ8 531 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 STARD7Q9NQZ5 370 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 TPCN1Q9ULQ1 816 aa19.2■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 SMCO2A6NFE2 343 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ZEB2O60315 1214 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CDKL5O76039 1030 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ARIH2O95376 493 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ASGR1P07306 291 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 SSRP1Q08945 709 aaKnown RBP19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 BRDTQ58F21 947 aaPredicted RBP19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CCSAPQ6IQ19 270 aaPredicted RBP19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ZFP91Q96JP5 570 aaPredicted RBP19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 GLT8D2Q9H1C3 349 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ATP11BQ9Y2G3 1177 aa19.19■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 KIAA1217Q5T5P2 1943 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CTAGE5O15320 804 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CPT1AP50416 773 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 RTP1P59025 263 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 NKX3-2P78367 333 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 SCRN1Q12765 414 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PKN1Q16512 942 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 SLC39A5Q6ZMH5 540 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 TEX2Q8IWB9 1127 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CCDC148Q8NFR7 591 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 COPS5Q92905 334 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 VTI1AQ96AJ9 217 aa19.18■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 H0YGN5 161 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PFKFB2O60825 505 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 STAM2O75886 525 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 GH1P01241 217 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 LY6KQ17RY6 165 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PCNX4Q63HM2 1172 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CCDC62Q6P9F0 684 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 C6orf50Q9HD87 102 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ESYT2A0FGR8 921 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 RGS20O76081 388 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 DEXIO95424 95 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 MRPS9P82933 396 aaKnown RBP19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 AP3B2Q13367 1082 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 TRIM60Q495X7 471 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 XRRA1Q6P2D8 792 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 KCNV1Q6PIU1 500 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CXCL17Q6UXB2 119 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 RTEL1Q9NZ71 1219 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 VPS54Q9P1Q0 977 aa19.16■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 CABYRO75952 493 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 FOSP01100 380 aaPredicted RBP19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 MYL3P08590 195 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 GNA11P29992 359 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 SNX17Q15036 470 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 REXO1Q8N1G1 1221 aaKnown RBP19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 PGBD1Q96JS3 809 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 INPP4AQ96PE3 977 aaPredicted RBP19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ANO3Q9BYT9 981 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ZMYND12Q9H0C1 365 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 POLR3EQ9NVU0 708 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 TMEM260Q9NX78 707 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 DDX41Q9UJV9 622 aaKnown RBP19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 ELP1O95163 1332 aa19.15■□□□□ 0.66
TVP23C-CDRT4-204ENST00000557349 A0A0U1RQG5 324 aaPredicted RBP19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 FIBPO43427 364 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 LARGE1O95461 756 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 UBA1P22314 1058 aaKnown RBP19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 ARHGAP1Q07960 439 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 ME3Q16798 604 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 NLRX1Q86UT6 975 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 DHX37Q8IY37 1157 aaKnown RBP19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 NECAB1Q8N987 351 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 BICD2Q8TD16 824 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 GTF3C6Q969F1 213 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 PRKAG2Q9UGJ0 569 aa19.14■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 SORBS3O60504 671 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 PQBP1O60828 265 aaKnown RBP19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 GGPS1O95749 300 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 TGFB3P10600 412 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 SYN1P17600 705 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 NLRP5P59047 1200 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 C1orf53Q5VUE5 145 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 JAKMIP3Q5VZ66 844 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 AFG1LQ8WV93 481 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 KIF2CQ99661 725 aa19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 PRDM5Q9NQX1 630 aaPredicted RBP19.13■□□□□ 0.65
TVP23C-CDRT4-204ENST00000557349 SH3GLB2Q9NR46 395 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms