RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
SHMT2-229ENST00000557348 SUPT20HL1Q3ZLR7 823 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 TMEM119Q4V9L6 283 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 ARHGAP27Q6ZUM4 889 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 CDAN1Q8IWY9 1227 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 LARP4BQ92615 738 aaKnown RBP14.15□□□□□ -0.14
SHMT2-229ENST00000557348 MTRQ99707 1265 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 HSD3B7Q9H2F3 369 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 EXOC1Q9NV70 894 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 FANCLQ9NW38 375 aa14.15□□□□□ -0.14
SHMT2-229ENST00000557348 SHTN1A0MZ66 631 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 PPP1R3GB7ZBB8 358 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 PSMA7O14818 248 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 EDIL3O43854 480 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 TPM1P09493 284 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 PTGS1P23219 599 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 FILIP1LQ4L180 1135 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 CEP135Q66GS9 1140 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 HAS1Q92839 578 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 MMTAG2Q9BU76 263 aaKnown RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 TRIM9Q9C026 710 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 BLZF1Q9H2G9 400 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 BMP2KQ9NSY1 1161 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 ZNF76P36508 570 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 SETQ01105 290 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 GHRHRQ02643 423 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 NYAP1Q6ZVC0 841 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 GIMAP8Q8ND71 665 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 RAD54LQ92698 747 aa14.14□□□□□ -0.15
SHMT2-229ENST00000557348 DHTKD1Q96HY7 919 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-229ENST00000557348 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 EGFRP00533 1210 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 PRELPP51888 382 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 FMR1Q06787 632 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHMT2-229ENST00000557348 PSMD2Q13200 908 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 GRB10Q13322 594 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 PTPN14Q15678 1187 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 ZYXQ15942 572 aaKnown RBP14.13□□□□□ -0.15
SHMT2-229ENST00000557348 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 NOL9Q5SY16 702 aaKnown RBP14.13□□□□□ -0.15
SHMT2-229ENST00000557348 ANGEL2Q5VTE6 544 aaKnown RBP14.13□□□□□ -0.15
SHMT2-229ENST00000557348 LDHDQ86WU2 507 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 LRRC8AQ8IWT6 810 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 ADSSL1Q8N142 457 aa14.13□□□□□ -0.15
SHMT2-229ENST00000557348 SRRTQ9BXP5 876 aaKnown RBP14.13□□□□□ -0.15
SHMT2-229ENST00000557348 OPLAHO14841 1288 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 ATP1A3P13637 1013 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 MUTP22033 750 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 SFPQP23246 707 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHMT2-229ENST00000557348 ASIC1P78348 528 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 KMT5BQ4FZB7 885 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 CDKAL1Q5VV42 579 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 FOXR2Q6PJQ5 311 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 KRT26Q7Z3Y9 468 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 VSTM4Q8IW00 320 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 ETNPPLQ8TBG4 499 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 STAMQ92783 540 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 C12orf42Q96LP6 360 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 CCPG1Q9ULG6 757 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 ATAD5Q96QE3 1844 aa14.12□□□□□ -0.15
SHMT2-229ENST00000557348 DICER1Q9UPY3 1922 aaKnown RBP14.12□□□□□ -0.15
SHMT2-229ENST00000557348 POTEMA6NI47 508 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 KLRC4O43908 158 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 ZBED4O75132 1171 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 SLU7O95391 586 aaKnown RBP14.11□□□□□ -0.15
SHMT2-229ENST00000557348 CFBP00751 764 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 CCT6AP40227 531 aaKnown RBP14.11□□□□□ -0.15
SHMT2-229ENST00000557348 BACE1P56817 501 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 PRR16Q569H4 304 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 NBPF12Q5TAG4 269 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-229ENST00000557348 KLHL10Q6JEL2 608 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 CCDC174Q6PII3 467 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 TMC6Q7Z403 805 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 FILIP1Q7Z7B0 1213 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 FAM114A1Q8IWE2 563 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 ZNF280CQ8ND82 737 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 TSC1Q92574 1164 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 WRNIP1Q96S55 665 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 ADARB2Q9NS39 739 aaKnown RBP14.11□□□□□ -0.15
SHMT2-229ENST00000557348 GGA3Q9NZ52 723 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 PPP1R9AQ9ULJ8 1098 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 DOCK1Q14185 1865 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 MYPNQ86TC9 1320 aa14.11□□□□□ -0.15
SHMT2-229ENST00000557348 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
SHMT2-229ENST00000557348 CASP1P29466 404 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 HSD17B4P51659 736 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 OAZ1P54368 228 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 SNAP25P60880 206 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 PDE4DQ08499 809 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 GPR162Q16538 588 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 TEX35Q5T0J7 233 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 NIPA1Q7RTP0 329 aa14.1□□□□□ -0.15
SHMT2-229ENST00000557348 TRMT44Q8IYL2 757 aaKnown RBP14.1□□□□□ -0.15
SHMT2-229ENST00000557348 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms