RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 SPDYE3A6NKU9 549 aa28.19■■■□□ 2.1
SDR39U1-221ENST00000556707 TTLL4Q14679 1199 aa28.19■■■□□ 2.1
SDR39U1-221ENST00000556707 SEPT14Q6ZU15 432 aa28.19■■■□□ 2.1
SDR39U1-221ENST00000556707 TLK2Q86UE8 772 aa28.19■■■□□ 2.1
SDR39U1-221ENST00000556707 IL27Q8NEV9 243 aa28.19■■■□□ 2.1
SDR39U1-221ENST00000556707 SH3GLB2Q9NR46 395 aa28.19■■■□□ 2.1
SDR39U1-221ENST00000556707 STK36Q9NRP7 1315 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 NKRFO15226 690 aaKnown RBP eCLIP28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 CTDNEP1O95476 244 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 C6orf222P0C671 652 aaPredicted RBP28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 CST5P28325 142 aaPredicted RBP28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 NKX3-2P78367 333 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 CCDC148Q8NFR7 591 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 C6orf50Q9HD87 102 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 PCDHA6Q9UN73 950 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 PCDHA8Q9Y5H6 950 aa28.18■■■□□ 2.1
SDR39U1-221ENST00000556707 DYNC1LI2O43237 492 aaPredicted RBP28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 FOSP01100 380 aaPredicted RBP28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 PTGS1P23219 599 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 XRRA1Q6P2D8 792 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 CCDC62Q6P9F0 684 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 TSEN34Q9BSV6 310 aaKnown RBP28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 HTATIP2Q9BUP3 242 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 AP5M1Q9H0R1 490 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 VPS54Q9P1Q0 977 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 DNAH12Q6ZR08 3092 aa28.17■■■□□ 2.1
SDR39U1-221ENST00000556707 MYADML2A6NDP7 307 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 CTAGE5O15320 804 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 STAM2O75886 525 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 RGS20O76081 388 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 ARIH2O95376 493 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 TXNP10599 105 aaKnown RBP28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 GNA11P29992 359 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 CLK2P49760 499 aaKnown RBP28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 IRX5P78411 483 aaPredicted RBP28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 MRPS9P82933 396 aaKnown RBP28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 PCNX4Q63HM2 1172 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 ZSCAN31Q96LW9 406 aaPredicted RBP28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 EHMT1Q9H9B1 1298 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 PHF24Q9UPV7 400 aa28.16■■■□□ 2.1
SDR39U1-221ENST00000556707 ST18O60284 1047 aa28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 AP3B2Q13367 1082 aa28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 GNASQ5JWF2 1037 aa28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 CCSAPQ6IQ19 270 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 FAM177A1Q8N128 213 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 ZFP91Q96JP5 570 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 SENP6Q9GZR1 1112 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-221ENST00000556707 ST3GAL1Q11201 340 aa28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 KCNA10Q16322 511 aa28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 PCSK9Q8NBP7 692 aaKnown RBP28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 BICD2Q8TD16 824 aa28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 AIFM3Q96NN9 605 aa28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 ANO3Q9BYT9 981 aa28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 SH2B1Q9NRF2 756 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 ORC3Q9UBD5 711 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 MRVI1Q9Y6F6 885 aa28.14■■■□□ 2.1
SDR39U1-221ENST00000556707 FSCN1Q16658 493 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 KCNV1Q6PIU1 500 aa28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 REXO1Q8N1G1 1221 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 NSUN7Q8NE18 718 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 COPS5Q92905 334 aa28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 INPP4AQ96PE3 977 aaPredicted RBP28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 TMEM260Q9NX78 707 aa28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 DDX41Q9UJV9 622 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-221ENST00000556707 DOCK5Q9H7D0 1870 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 MOXD2PA6NHM9 499 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 DTNBO60941 627 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 ACLYP53396 1101 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 NLRP5P59047 1200 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 BEX3Q00994 111 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 LY6KQ17RY6 165 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 GNPTABQ3T906 1256 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 JAKMIP3Q5VZ66 844 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 MCTP2Q6DN12 878 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 OR6J1Q8NGC5 347 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 PGBD1Q96JS3 809 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 RTEL1Q9NZ71 1219 aa28.12■■■□□ 2.09
SDR39U1-221ENST00000556707 ADAMTS3O15072 1205 aa28.11■■■□□ 2.09
SDR39U1-221ENST00000556707 TGFB3P10600 412 aa28.11■■■□□ 2.09
SDR39U1-221ENST00000556707 FERMT2Q96AC1 680 aa28.11■■■□□ 2.09
SDR39U1-221ENST00000556707 GH1P01241 217 aa28.1■■■□□ 2.09
SDR39U1-221ENST00000556707 ASGR1P07306 291 aa28.1■■■□□ 2.09
SDR39U1-221ENST00000556707 FDPSP14324 419 aaKnown RBP28.1■■■□□ 2.09
SDR39U1-221ENST00000556707 ICAM3P32942 547 aa28.1■■■□□ 2.09
SDR39U1-221ENST00000556707 CCDC83Q8IWF9 413 aa28.1■■■□□ 2.09
SDR39U1-221ENST00000556707 WASF1Q92558 559 aa28.1■■■□□ 2.09
SDR39U1-221ENST00000556707 A0A1W2PQ45 241 aaPredicted RBP28.09■■■□□ 2.09
SDR39U1-221ENST00000556707 A0A1W2PQY0 241 aa28.09■■■□□ 2.09
SDR39U1-221ENST00000556707 ZEB2O60315 1214 aa28.09■■■□□ 2.09
SDR39U1-221ENST00000556707 SREBF1P36956 1147 aa28.09■■■□□ 2.09
SDR39U1-221ENST00000556707 DPF3Q92784 378 aa28.09■■■□□ 2.09
SDR39U1-221ENST00000556707 SPATA31C2B4DYI2 1134 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 JAK2O60674 1132 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 XBP1P17861 261 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 CPT1AP50416 773 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 ARHGAP1Q07960 439 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 GALNT17Q6IS24 598 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 NLRX1Q86UT6 975 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 PCDHA4Q9UN74 947 aa28.08■■■□□ 2.09
SDR39U1-221ENST00000556707 UBIAD1Q9Y5Z9 338 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms