RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, human

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-222	ENST00000556700	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
NUMB-222	ENST00000556700	SUGCT	Q9HAC7	445 aa		13.41	□□□□□ -0.26
NUMB-222	ENST00000556700	ADD3	Q9UEY8	706 aa	Known RBP	13.41	□□□□□ -0.26
NUMB-222	ENST00000556700	KIF28P	B7ZC32	967 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	ARIH2	O95376	493 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	TOP1	P11387	765 aa	Known RBP	13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	WDR5	P61964	334 aa	Known RBP	13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	FAM47C	Q5HY64	1035 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	SLC30A10	Q6XR72	485 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	RALYL	Q86SE5	291 aa	Known RBP	13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	DHX38	Q92620	1227 aa	Known RBP	13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	TTC14	Q96N46	770 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	UBAC1	Q9BSL1	405 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	ANO2	Q9NQ90	1003 aa		13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	GPHN	Q9NQX3	736 aa	Predicted RBP	13.4	□□□□□ -0.26
NUMB-222	ENST00000556700	NEDD4	P46934	1319 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	C5orf42	Q9H799	3197 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	NKRF	O15226	690 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	KPNA6	O60684	536 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	CXCL10	P02778	98 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	ERVK-21	P61565	698 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	DEFB103A	P81534	67 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	RNF20	Q5VTR2	975 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	GDF6	Q6KF10	455 aa	Predicted RBP	13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	CCDC62	Q6P9F0	684 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	SESTD1	Q86VW0	696 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	FAM178B	Q8IXR5	827 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	DCAF4	Q8WV16	495 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	IL25	Q9H293	177 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	TANC1	Q9C0D5	1861 aa		13.39	□□□□□ -0.27
NUMB-222	ENST00000556700	ERICH2	A1L162	156 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700		B4E1Z4	1266 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	NBN	O60934	754 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	KDM4A	O75164	1064 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	RPS6	P62753	249 aa	Known RBP	13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	PTH1R	Q03431	593 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	RBL2	Q08999	1139 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	BFSP2	Q13515	415 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	SART3	Q15020	963 aa	Known RBP	13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	PTGIS	Q16647	500 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	CCDC96	Q2M329	555 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	SYDE2	Q5VT97	1194 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	TRAF7	Q6Q0C0	670 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	SKAP1	Q86WV1	359 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	DGKH	Q86XP1	1220 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	NCOA7	Q8NI08	942 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	GDPD5	Q8WTR4	605 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	KAT2B	Q92831	832 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	MAP4K1	Q92918	833 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	MTMR7	Q9Y216	660 aa		13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	RBM8A	Q9Y5S9	174 aa	Known RBP	13.38	□□□□□ -0.27
NUMB-222	ENST00000556700	COL4A4	P53420	1690 aa	Predicted RBP	13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	PTPDC1	A2A3K4	754 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	GJB5	O95377	273 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	CYP21A2	P08686	494 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	TXN	P10599	105 aa	Known RBP	13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	CALML3	P27482	149 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	LEXM	Q3ZCV2	418 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	RNF207	Q6ZRF8	634 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	ALYREF	Q86V81	257 aa	Known RBP	13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	AFAP1L1	Q8TED9	768 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	SCFD2	Q8WU76	684 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	RAD9A	Q99638	391 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	UBE2Z	Q9H832	354 aa	Predicted RBP	13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	KAT14	Q9H8E8	782 aa		13.37	□□□□□ -0.27
NUMB-222	ENST00000556700	LINC01553	A4QN01	128 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	PRR33	A8MZF0	331 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	SELP	P16109	830 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	PDE4D	Q08499	809 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	PPP2R5B	Q15173	497 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	BRDT	Q58F21	947 aa	Predicted RBP	13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	GJD3	Q8N144	294 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	DNER	Q8NFT8	737 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	CAGE1	Q8TC20	777 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	AFG1L	Q8WV93	481 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	TBC1D5	Q92609	795 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	TMEM47	Q9BQJ4	181 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	LSG1	Q9H089	658 aa	Known RBP	13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	GPCPD1	Q9NPB8	672 aa		13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.36	□□□□□ -0.27
NUMB-222	ENST00000556700	POTEB3	A0JP26	581 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	EIF5B	O60841	1220 aa	Known RBP	13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	REC8	O95072	547 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	CKB	P12277	381 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	IL9	P15248	144 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	KCNJ6	P48051	423 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	ARHGAP1	Q07960	439 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	MKRN4P	Q13434	485 aa	Predicted RBP	13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	MBTPS1	Q14703	1052 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	TRIM71	Q2Q1W2	868 aa	Known RBP	13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	IFIT1B	Q5T764	474 aa	Known RBP	13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	CNKSR3	Q6P9H4	555 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	POTEB	Q6S5H4	581 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	LRRC8D	Q7L1W4	858 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	RGS22	Q8NE09	1264 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	WNT8B	Q93098	351 aa		13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	TGS1	Q96RS0	853 aa	Known RBP	13.35	□□□□□ -0.27
NUMB-222	ENST00000556700	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms