RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
XRCC3-216ENST00000556682 GRIN2DO15399 1336 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 B4GALT4O60513 344 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 STAM2O75886 525 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 ARIH2O95376 493 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 TGFB3P10600 412 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 FGD1P98174 961 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
XRCC3-216ENST00000556682 PGM5Q15124 567 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 DGKDQ16760 1214 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 FAM47CQ5HY64 1035 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 FAM109BQ6ICB4 259 aaPredicted RBP12.46□□□□□ -0.41
XRCC3-216ENST00000556682 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 SMARCC2Q8TAQ2 1214 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 AFG1LQ8WV93 481 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 LRRC2Q9BYS8 371 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.41
XRCC3-216ENST00000556682 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
XRCC3-216ENST00000556682 REC8O95072 547 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 ARHGAP1Q07960 439 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 NBPF20Q3BBV1 942 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 ZNF697Q5TEC3 545 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 PSRC1Q6PGN9 363 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 SRBD1Q8N5C6 995 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 RANBP2P49792 3224 aaKnown RBP12.45□□□□□ -0.42
XRCC3-216ENST00000556682 DNAH12Q6ZR08 3092 aa12.45□□□□□ -0.42
XRCC3-216ENST00000556682 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-216ENST00000556682 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-216ENST00000556682 PIK3CDO00329 1044 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 PLEKHA8P1O95397 391 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 MMP3P08254 477 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 CSF2RAP15509 400 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 RXRAP19793 462 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 CYP2C18P33260 490 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 EPHB4P54760 987 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 CHMP4BP1P59074 171 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 PPTC7Q8NI37 304 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 NOC4LQ9BVI4 516 aaKnown RBP12.44□□□□□ -0.42
XRCC3-216ENST00000556682 KATNAL1Q9BW62 490 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 NOD1Q9Y239 953 aa12.44□□□□□ -0.42
XRCC3-216ENST00000556682 LCTP09848 1927 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 ZBTB43O43298 467 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 PPFIA4O75335 1185 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 FGBP02675 491 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 BFSP2Q13515 415 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 RTN1Q16799 776 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 CELF3Q5SZQ8 465 aaKnown RBP12.43□□□□□ -0.42
XRCC3-216ENST00000556682 XRRA1Q6P2D8 792 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 APOA5Q6Q788 366 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 TMTC3Q6ZXV5 915 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 Q7L0L9 218 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 CMTR1Q8N1G2 835 aaKnown RBP12.43□□□□□ -0.42
XRCC3-216ENST00000556682 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 SPATA33Q96N06 139 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.42
XRCC3-216ENST00000556682 PSTPIP2Q9H939 334 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 IL23AQ9NPF7 189 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 TRMT13Q9NUP7 481 aaKnown RBP12.43□□□□□ -0.42
XRCC3-216ENST00000556682 MTMR10Q9NXD2 777 aa12.43□□□□□ -0.42
XRCC3-216ENST00000556682 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 GGPS1O95749 300 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 ACRP10323 421 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 PSMA5P28066 241 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 RCAN1P53805 252 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 CCL23P55773 120 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 NEDD9Q14511 834 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 ADCK5Q3MIX3 580 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 TMEM240Q5SV17 173 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 NLRX1Q86UT6 975 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 RAB11FIP4Q86YS3 637 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 TEX2Q8IWB9 1127 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 C7orf31Q8N865 590 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 EHMT1Q9H9B1 1298 aa12.42□□□□□ -0.42
XRCC3-216ENST00000556682 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
XRCC3-216ENST00000556682 LTBP2Q14767 1821 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 SPDYE3A6NKU9 549 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 NOP56O00567 594 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms