RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 FOSBP53539 338 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 SETQ01105 290 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-212ENST00000556541 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 STXBP2Q15833 593 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 INF2Q27J81 1249 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 Q4G0T1 1027 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 EARS2Q5JPH6 523 aaKnown RBP12.82□□□□□ -0.36
FOXN3-212ENST00000556541 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 FCHSD1Q86WN1 690 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 ZNF396Q96N95 335 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-212ENST00000556541 INPP4AQ96PE3 977 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-212ENST00000556541 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
FOXN3-212ENST00000556541 IGLV3-22A0A075B6J6 115 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 MEIS1O00470 390 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 PGK2P07205 417 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 TGFB3P10600 412 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 CTCFP49711 727 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 TOB1P50616 345 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 GNPTABQ3T906 1256 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 CEP55Q53EZ4 464 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 CD99L2Q8TCZ2 262 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 TINF2Q9BSI4 451 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 VTA1Q9NP79 307 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 JADE2Q9NQC1 790 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
FOXN3-212ENST00000556541 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
FOXN3-212ENST00000556541 YEATS4O95619 227 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
FOXN3-212ENST00000556541 PRPHP41219 470 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 FLT3LGP49771 235 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
FOXN3-212ENST00000556541 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 NLRX1Q86UT6 975 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 NPLOC4Q8TAT6 608 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 LENG9Q96B70 501 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
FOXN3-212ENST00000556541 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 CAP1Q01518 475 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 PRKCZQ05513 592 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 PDE4DQ08499 809 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 OTOP1Q7RTM1 612 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 IL31RAQ8NI17 732 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 FAM20AQ96MK3 541 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 SENP7Q9BQF6 1050 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 KCNMB3Q9NPA1 279 aa12.79□□□□□ -0.36
FOXN3-212ENST00000556541 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 FIBPO43427 364 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 SNAI1O95863 264 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 ITGB5P18084 799 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 KRT85P78386 507 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 LETM2Q2VYF4 491 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 SLFN12Q8IYM2 578 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 C4orf32Q8N8J7 132 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 GIMAP8Q8ND71 665 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 SCAND2PQ9GZW5 306 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 PRDM10Q9NQV6 1147 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
FOXN3-212ENST00000556541 GABRQQ9UN88 632 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 NFASCO94856 1347 aa12.78□□□□□ -0.36
FOXN3-212ENST00000556541 SPATA31C2B4DYI2 1134 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 NKRFO15226 690 aaKnown RBP eCLIP12.77□□□□□ -0.37
FOXN3-212ENST00000556541 NEMFO60524 1076 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 CCNT1O60563 726 aaKnown RBP12.77□□□□□ -0.37
FOXN3-212ENST00000556541 PPP6R2O75170 966 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 RGS20O76081 388 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 HMGCRP04035 888 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 ZNF76P36508 570 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 SLC39A14Q15043 492 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 PTPAQ15257 358 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 MAP3K21Q5TCX8 1036 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 MFSD14CQ5VZR4 134 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 ETNPPLQ8TBG4 499 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 SCFD2Q8WU76 684 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 SLC5A5Q92911 643 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 RIT2Q99578 217 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms