RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 HOXD10P28358 340 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 MARCKSP29966 332 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-218ENST00000556343 LONP1P36776 959 aaKnown RBP10.43□□□□□ -0.74
ACTN1-218ENST00000556343 MAP2K1Q02750 393 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PDE4DQ08499 809 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 NBR1Q14596 966 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PGM5Q15124 567 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PRR16Q569H4 304 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 NOM1Q5C9Z4 860 aaKnown RBP10.43□□□□□ -0.74
ACTN1-218ENST00000556343 KCNV1Q6PIU1 500 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 CCDC73Q6ZRK6 1079 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 VSIG10LQ86VR7 867 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 CCDC34Q96HJ3 373 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PDCD2LQ9BRP1 358 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PYM1Q9BRP8 204 aaKnown RBP10.43□□□□□ -0.74
ACTN1-218ENST00000556343 CFHR5Q9BXR6 569 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PORCNQ9H237 461 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 JADE2Q9NQC1 790 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 LMBRD1Q9NUN5 540 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 PCDHA7Q9UN72 937 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 FRMPD4Q14CM0 1322 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 ADGRA2Q96PE1 1338 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 TNPO2O14787 897 aaKnown RBP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 PEX10O60683 326 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 TDP2O95551 362 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 CMA1P23946 247 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 ADORA2AP29274 412 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 ALDH5A1P51649 535 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 C1QTNF8P60827 252 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 MSL3Q8N5Y2 521 aaKnown RBP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 FAM133AQ8N9E0 248 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 CRYGNQ8WXF5 182 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 SOCS4Q8WXH5 440 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 SYAP1Q96A49 352 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 GPRASP2Q96D09 838 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 AK8Q96MA6 479 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 MBOAT7Q96N66 472 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 ZIC5Q96T25 663 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 FTOQ9C0B1 505 aaKnown RBP eCLIP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 RNF186Q9NXI6 227 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 SAGE1Q9NXZ1 904 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 COL20A1Q9P218 1284 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 PCDHA12Q9UN75 941 aa10.42□□□□□ -0.74
ACTN1-218ENST00000556343 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
ACTN1-218ENST00000556343 DNAJC25-GNG10A0A024R161 153 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 VWA3AA6NCI4 1184 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 MEIS1O00470 390 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 SLC26A4O43511 780 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 TRPA1O75762 1119 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 RGS2P41220 211 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 UBA7P41226 1012 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 TXKP42681 527 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 UBXN2AP68543 259 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 SP3Q02447 781 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 MTMR1Q13613 665 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 GRB14Q14449 540 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 PDIA5Q14554 519 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 C4orf32Q8N8J7 132 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 GIMAP8Q8ND71 665 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-218ENST00000556343 ERMNQ8TAM6 284 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 MRPS27Q92552 414 aaKnown RBP10.41□□□□□ -0.74
ACTN1-218ENST00000556343 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 ZNF577Q9BSK1 485 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 TBC1D22BQ9NU19 505 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 CCDC39Q9UFE4 941 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 FBXO2Q9UK22 296 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-218ENST00000556343 UBIAD1Q9Y5Z9 338 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 RLFQ13129 1914 aa10.41□□□□□ -0.74
ACTN1-218ENST00000556343 SOWAHBA6NEL2 793 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 GNRH1P01148 92 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 PGK2P07205 417 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 TGFB3P10600 412 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.74
ACTN1-218ENST00000556343 CNTN2Q02246 1040 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 MAP2K5Q13163 448 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 ZNF792Q3KQV3 632 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 TPRNQ4KMQ1 711 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 KRT79Q5XKE5 535 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 POTEDQ86YR6 584 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 TRMT44Q8IYL2 757 aaKnown RBP10.4□□□□□ -0.74
ACTN1-218ENST00000556343 FSIP1Q8NA03 581 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 RASSF8Q8NHQ8 419 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 CALML4Q96GE6 196 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 MTMR9Q96QG7 549 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 RIT2Q99578 217 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 SDF4Q9BRK5 362 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 TEKT3Q9BXF9 490 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 WDR11Q9BZH6 1224 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 TMEM60Q9H2L4 133 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 TTC12Q9H892 705 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-218ENST00000556343 LRWD1Q9UFC0 647 aa10.4□□□□□ -0.74
ACTN1-218ENST00000556343 HOOK1Q9UJC3 728 aaKnown RBP10.4□□□□□ -0.74
ACTN1-218ENST00000556343 FAM86B1E9PN63 330 aa10.39□□□□□ -0.75
ACTN1-218ENST00000556343 MSH4O15457 936 aa10.39□□□□□ -0.75
ACTN1-218ENST00000556343 SLC37A4O43826 429 aa10.39□□□□□ -0.75
ACTN1-218ENST00000556343 TRAK2O60296 914 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms