RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 SUPT20HL2P0C7V6 817 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 ALDH5A1P51649 535 aaPredicted RBP12.66□□□□□ -0.38
SYNE2-221ENST00000556342 PURAQ00577 322 aaKnown RBP12.66□□□□□ -0.38
SYNE2-221ENST00000556342 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
SYNE2-221ENST00000556342 POLR3EQ9NVU0 708 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 ADD3Q9UEY8 706 aaKnown RBP12.66□□□□□ -0.38
SYNE2-221ENST00000556342 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 ADGRG1Q9Y653 693 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-221ENST00000556342 ERC2O15083 957 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 NOVP48745 357 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 CTDSPL2Q05D32 466 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 BAATQ14032 418 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-221ENST00000556342 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
SYNE2-221ENST00000556342 CCDC96Q2M329 555 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 PI4K2BQ8TCG2 481 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 DCAF4Q8WV16 495 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 NECAB3Q96P71 396 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-221ENST00000556342 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 TRANK1O15050 2925 aa12.65□□□□□ -0.38
SYNE2-221ENST00000556342 RBM47A0AV96 593 aaKnown RBP12.64□□□□□ -0.39
SYNE2-221ENST00000556342 NFIBO00712 420 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 RANBP6O60518 1105 aaKnown RBP12.64□□□□□ -0.39
SYNE2-221ENST00000556342 CA3P07451 260 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 MYL3P08590 195 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 BMP1P13497 986 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 SLC16A2P36021 539 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 CPT1AP50416 773 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 TFF2Q03403 129 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 TTBK2Q6IQ55 1244 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 BTNL9Q6UXG8 535 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 DEFB128Q7Z7B8 93 aa12.64□□□□□ -0.39
SYNE2-221ENST00000556342 OTUD7AQ8TE49 926 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-221ENST00000556342 MTG1Q9BT17 334 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-221ENST00000556342 GBF1Q92538 1859 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 RFXAPO00287 272 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 ORC4O43929 436 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 POU3F3P20264 500 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-221ENST00000556342 SKIV2LQ15477 1246 aaKnown RBP12.63□□□□□ -0.39
SYNE2-221ENST00000556342 AAK1Q2M2I8 961 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 SLC30A10Q6XR72 485 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 SLC9A7Q96T83 725 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 MTCH2Q9Y6C9 303 aa12.63□□□□□ -0.39
SYNE2-221ENST00000556342 RAD50Q92878 1312 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 LCTP09848 1927 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
SYNE2-221ENST00000556342 ACTN1P12814 892 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 CALML3P27482 149 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 RFC2P35250 354 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 KCNQ1P51787 676 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 NBPF20Q3BBV1 942 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 BRDTQ58F21 947 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-221ENST00000556342 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
SYNE2-221ENST00000556342 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 PHOSPHO2Q8TCD6 241 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 CLEC4DQ8WXI8 215 aa12.62□□□□□ -0.39
SYNE2-221ENST00000556342 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-221ENST00000556342 EPOPA6NHQ4 379 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYNE2-221ENST00000556342 KPNA6O60684 536 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 FGRP09769 529 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 IQCF3P0C7M6 154 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
SYNE2-221ENST00000556342 EDNRBP24530 442 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 PDE4DQ08499 809 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 HERC6Q8IVU3 1022 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 RETREG2Q8NC44 543 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 PPP1R13LQ8WUF5 828 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 TMEM47Q9BQJ4 181 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 CERS4Q9HA82 394 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
SYNE2-221ENST00000556342 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 A6NJR5 290 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 KIF28PB7ZC32 967 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 ARHGEF15O94989 841 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 MX1P20591 662 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 PLA2G5P39877 138 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 RPS6P62753 249 aaKnown RBP12.6□□□□□ -0.39
SYNE2-221ENST00000556342 TAP1Q03518 808 aa12.6□□□□□ -0.39
SYNE2-221ENST00000556342 PTPN11Q06124 597 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-221ENST00000556342 BFSP2Q13515 415 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms