RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 KPNA6O60684 536 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 GJB5O95377 273 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 RNF207Q6ZRF8 634 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 LRRC8DQ7L1W4 858 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 AFAP1L1Q8TED9 768 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 SCFD2Q8WU76 684 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 ANKS1AQ92625 1134 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 TGS1Q96RS0 853 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 H3BQ06 376 aaPredicted RBP18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 SELPP16109 830 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 CSPP1Q1MSJ5 1256 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 CNKSR3Q6P9H4 555 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 RAD9AQ99638 391 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 C17orf80Q9BSJ5 609 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 PIEZO1Q92508 2521 aa18.6■□□□□ 0.57
SDR39U1-217ENST00000556249 NKRFO15226 690 aaKnown RBP eCLIP18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 RANBP6O60518 1105 aaKnown RBP18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 RPS6P62753 249 aaKnown RBP18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 NHLH1Q02575 133 aa18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 NMIQ13287 307 aaPredicted RBP18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 ZMYM1Q5SVZ6 1142 aa18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 CWC27Q6UX04 472 aaKnown RBP18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 CHST3Q7LGC8 479 aa18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 FBXL18Q96ME1 805 aa18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
SDR39U1-217ENST00000556249 GRXCR2A6NFK2 248 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 SGSM2O43147 1006 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 CKBP12277 381 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 ALADP13716 330 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 EDNRBP24530 442 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 LY6KQ17RY6 165 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 CCDC155Q8N6L0 562 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 DCAF4Q8WV16 495 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 KAT2BQ92831 832 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 FAM227BQ96M60 508 aa18.58■□□□□ 0.56
SDR39U1-217ENST00000556249 LOC102724159A0A0B4J2E5 919 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 A0A0D9SFI3 127 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 REC8O95072 547 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 CXCL10P02778 98 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 MMP3P08254 477 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 MFAP1P55081 439 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 PWP2Q15269 919 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 MCMDC2Q4G0Z9 681 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 BTNL9Q6UXG8 535 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 EP400NLQ6ZTU2 488 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
SDR39U1-217ENST00000556249 ABHD14A-ACY1A0A1B0GW23 586 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 FOXP2O15409 715 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 PPP4R3BQ5MIZ7 849 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 FBXO22Q8NEZ5 403 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 WNT8BQ93098 351 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 ALG1Q9BT22 464 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 SIP14410 1827 aa18.56■□□□□ 0.56
SDR39U1-217ENST00000556249 DCXO43602 365 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 ZNF200P98182 395 aaPredicted RBP18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 IKBKEQ14164 716 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 MBTPS1Q14703 1052 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 ZNF618Q5T7W0 954 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 CCDC62Q6P9F0 684 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 SESTD1Q86VW0 696 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 NEK9Q8TD19 979 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 TMEM47Q9BQJ4 181 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
SDR39U1-217ENST00000556249 NOVP48745 357 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 ARHGAP1Q07960 439 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 USH1GQ495M9 461 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 RRP12Q5JTH9 1297 aaKnown RBP18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 TRAF7Q6Q0C0 670 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 DNERQ8NFT8 737 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 TOMM22Q9NS69 142 aa18.54■□□□□ 0.56
SDR39U1-217ENST00000556249 CCDC171Q6TFL3 1326 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 GH1P01241 217 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 VPS53Q5VIR6 699 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 MYOCDQ8IZQ8 938 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 C7orf31Q8N865 590 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 MRPL38Q96DV4 380 aaKnown RBP18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 INSL6Q9Y581 213 aa18.53■□□□□ 0.56
SDR39U1-217ENST00000556249 WDFY4Q6ZS81 3184 aa18.52■□□□□ 0.56
SDR39U1-217ENST00000556249 SEC24BO95487 1268 aa18.52■□□□□ 0.56
SDR39U1-217ENST00000556249 ZNF286BP0CG31 522 aa18.52■□□□□ 0.56
SDR39U1-217ENST00000556249 PDHBP11177 359 aa18.52■□□□□ 0.56
SDR39U1-217ENST00000556249 TOP1P11387 765 aaKnown RBP18.52■□□□□ 0.56
SDR39U1-217ENST00000556249 PSEN2P49810 448 aa18.52■□□□□ 0.56
SDR39U1-217ENST00000556249 RBL2Q08999 1139 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms