RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 INHBBP09529 407 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 OLFML2BQ68BL8 750 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
ATXN3-233ENST00000555816 NLRX1Q86UT6 975 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-233ENST00000555816 HDAC8Q9BY41 377 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 IRF2BPLQ9H1B7 796 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 GMIPQ9P107 970 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 VTI1BQ9UEU0 232 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 EBF1Q9UH73 591 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 SLIT3O75094 1523 aa6.91□□□□□ -1.3
ATXN3-233ENST00000555816 SSU72P8A0A1W2PR75 194 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 ABLIM1O14639 778 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 PSPNO60542 156 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 GREM1O60565 184 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 RAG1P15918 1043 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 GARTP22102 1010 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 RPL10P27635 214 aaKnown RBP6.9□□□□□ -1.3
ATXN3-233ENST00000555816 CTSWP56202 376 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 SLC14A2Q15849 920 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 CDCP2Q5VXM1 449 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-233ENST00000555816 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 PARD6AQ9NPB6 346 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 ZMYM5Q9UJ78 669 aa6.9□□□□□ -1.3
ATXN3-233ENST00000555816 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.3
ATXN3-233ENST00000555816 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.31
ATXN3-233ENST00000555816 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-233ENST00000555816 PNLIPP16233 465 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 NBPF12Q5TAG4 269 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-233ENST00000555816 ERMP1Q7Z2K6 904 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 ZNF428Q96B54 188 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 TCTN2Q96GX1 697 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 MAP6Q96JE9 813 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 BCL11AQ9H165 835 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 GCM1Q9NP62 436 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-233ENST00000555816 ITSN1Q15811 1721 aa6.89□□□□□ -1.31
ATXN3-233ENST00000555816 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 DNAJA2O60884 412 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 UBOX5O94941 541 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 LRRFIP1Q32MZ4 808 aaKnown RBP6.88□□□□□ -1.31
ATXN3-233ENST00000555816 ARSHQ5FYA8 562 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-233ENST00000555816 REXO1Q8N1G1 1221 aaKnown RBP6.88□□□□□ -1.31
ATXN3-233ENST00000555816 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
ATXN3-233ENST00000555816 TNFRSF10DQ9UBN6 386 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 TCFL5Q9UL49 500 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 CHD4Q14839 1912 aa6.88□□□□□ -1.31
ATXN3-233ENST00000555816 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
ATXN3-233ENST00000555816 HOXA5P20719 270 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 EIF4A3P38919 411 aaKnown RBP6.87□□□□□ -1.31
ATXN3-233ENST00000555816 FBXL19Q6PCT2 694 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 IP6K1Q92551 441 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 SIGLEC10Q96LC7 697 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 CNNM2Q9H8M5 875 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 KBTBD4Q9NVX7 518 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 SIRT5Q9NXA8 310 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 KCTD3Q9Y597 815 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 PCDHB14Q9Y5E9 798 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
ATXN3-233ENST00000555816 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 F6X3S4 739 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 SIGLEC6O43699 453 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
ATXN3-233ENST00000555816 TMEM62Q0P6H9 643 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 ADGRF1Q5T601 910 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 NME9Q86XW9 330 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-233ENST00000555816 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 BRMS1Q9HCU9 246 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 COL18A1P39060 1754 aa6.86□□□□□ -1.31
ATXN3-233ENST00000555816 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-233ENST00000555816 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 TMEM82A0PJX8 343 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 WTIPA6NIX2 430 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-233ENST00000555816 RTP1P59025 263 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 ERVFRD-1P60508 538 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
ATXN3-233ENST00000555816 LAPTM5Q13571 262 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 GALNT18Q6P9A2 607 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 CEP128Q6ZU80 1094 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 FBXO27Q8NI29 283 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 RELTQ969Z4 430 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 FCRL2Q96LA5 508 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-233ENST00000555816 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms