RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 GOPCQ9HD26 462 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 GPR108Q9NPR9 543 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 TRMT13Q9NUP7 481 aaKnown RBP5.18□□□□□ -1.58
LINC00640-202ENST00000555801 MCM9Q9NXL9 1143 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 NCDNQ9UBB6 729 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 TMX2Q9Y320 296 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 WDR87Q6ZQQ6 2873 aa5.18□□□□□ -1.58
LINC00640-202ENST00000555801 PTPRSQ13332 1948 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 MYH2Q9UKX2 1941 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 MYH13Q9UKX3 1938 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 MAGEB6P1A0A0J9YX57 407 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 A0A1W2PRG0 241 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 TAF4O00268 1085 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 VWA5AO00534 786 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 KRT38O76015 456 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 BRD1O95696 1058 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 RBM25P49756 843 aaKnown RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 ITGA7Q13683 1181 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 CBX2Q14781 532 aaPredicted RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 COL19A1Q14993 1142 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 TTF1Q15361 905 aaPredicted RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 TCTN1Q2MV58 587 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 EPC2Q52LR7 807 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 TNNI3KQ59H18 835 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 N4BP2L1Q5TBK1 243 aaPredicted RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 LARP1BQ659C4 914 aaKnown RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 CWF19L1Q69YN2 538 aaKnown RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 MAMDC4Q6UXC1 1216 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 ADGRA1Q86SQ6 560 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 SPICE1Q8N0Z3 855 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 ANKRD35Q8N283 1001 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 DTWD2Q8NBA8 298 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 AP5M1Q9H0R1 490 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 FBXO40Q9UH90 709 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 CTNNA3Q9UI47 895 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 RCAN3Q9UKA8 241 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 PPP1R9AQ9ULJ8 1098 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 NOB1Q9ULX3 412 aaKnown RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 USP15Q9Y4E8 981 aaPredicted RBP5.17□□□□□ -1.58
LINC00640-202ENST00000555801 FPGT-TNNI3KV9GXZ4 949 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 ZNF236Q9UL36 1845 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 GRIN2DO15399 1336 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 TET1Q8NFU7 2136 aa5.17□□□□□ -1.58
LINC00640-202ENST00000555801 SIP14410 1827 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 SPEGQ15772 3267 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 RALGAPA2Q2PPJ7 1873 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 SRRM3A6NNA2 597 aaPredicted RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 IPO8O15397 1037 aaKnown RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 WIPF1O43516 503 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 ZBED4O75132 1171 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 SDHBP21912 280 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 GUCY1A2P33402 732 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 RFC2P35250 354 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 SLC4A3P48751 1232 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 PLCD1P51178 756 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 GABPAQ06546 454 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 CTC1Q2NKJ3 1217 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 CCDC144BQ3MJ40 725 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 BRDTQ58F21 947 aaPredicted RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 SNRNP48Q6IEG0 339 aaKnown RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 C19orf48Q6RUI8 117 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 UNQ6494/PRO21346Q6UXR6 183 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 CCDC105Q8IYK2 499 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 TRMT2AQ8IZ69 625 aaKnown RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 RETREG2Q8NC44 543 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 ADAM32Q8TC27 787 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 PTCD2Q8WV60 388 aaKnown RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 CLUAP1Q96AJ1 413 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 RAD9AQ99638 391 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 DBNDD2Q9BQY9 259 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 ANP32EQ9BTT0 268 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 PHF7Q9BWX1 381 aaPredicted RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 UPF3AQ9H1J1 476 aaKnown RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 KANSL2Q9H9L4 492 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 PIH1D3Q9NQM4 214 aaKnown RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 BARX2Q9UMQ3 279 aaPredicted RBP5.16□□□□□ -1.58
LINC00640-202ENST00000555801 IGF2RP11717 2491 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 ATAD5Q96QE3 1844 aa5.16□□□□□ -1.58
LINC00640-202ENST00000555801 HELZ2Q9BYK8 2649 aaKnown RBP5.15□□□□□ -1.58
LINC00640-202ENST00000555801 COL4A3Q01955 1670 aa5.15□□□□□ -1.58
LINC00640-202ENST00000555801 ASB14A6NK59 587 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 SURF6O75683 361 aaKnown RBP5.15□□□□□ -1.59
LINC00640-202ENST00000555801 GJB5O95377 273 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 SNAI1O95863 264 aaPredicted RBP5.15□□□□□ -1.59
LINC00640-202ENST00000555801 ASGR2P07307 311 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 SPINK2P20155 84 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 PMLP29590 882 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 TNFAIP2Q03169 654 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 FSCN1Q16658 493 aaKnown RBP5.15□□□□□ -1.59
LINC00640-202ENST00000555801 C20orf194Q5TEA3 1177 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 ARMCX2Q7L311 632 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 TLK2Q86UE8 772 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 PRPF38AQ8NAV1 312 aaKnown RBP5.15□□□□□ -1.59
LINC00640-202ENST00000555801 SLC43A3Q8NBI5 491 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 SUMF1Q8NBK3 374 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 CHST13Q8NET6 341 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 TMC2Q8TDI7 906 aa5.15□□□□□ -1.59
LINC00640-202ENST00000555801 ARHGAP45Q92619 1136 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms