RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 SZT2Q5T011 3432 aa17.4■□□□□ 0.38
IFT43-211ENST00000555677 SCN10AQ9Y5Y9 1956 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 KLF18A0A0U1RQI7 1052 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 SOX1O00570 391 aaPredicted RBP17.39■□□□□ 0.37
IFT43-211ENST00000555677 MEIS2O14770 477 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 CD4P01730 458 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 MYL3P08590 195 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
IFT43-211ENST00000555677 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 BLOC1S2Q6QNY1 142 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 IL31RAQ8NI17 732 aa17.39■□□□□ 0.37
IFT43-211ENST00000555677 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
IFT43-211ENST00000555677 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
IFT43-211ENST00000555677 LAMA2P24043 3122 aaKnown RBP17.39■□□□□ 0.37
IFT43-211ENST00000555677 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 RAG1P15918 1043 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 CDC27P30260 824 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 FGD1P98174 961 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 RTN1Q16799 776 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 BRDTQ58F21 947 aaPredicted RBP17.38■□□□□ 0.37
IFT43-211ENST00000555677 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 TBX21Q9UL17 535 aa17.38■□□□□ 0.37
IFT43-211ENST00000555677 TLR3O15455 904 aaKnown RBP17.37■□□□□ 0.37
IFT43-211ENST00000555677 TIMP1P01033 207 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 GH1P01241 217 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
IFT43-211ENST00000555677 RPS6KB1P23443 525 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 PSMA5P28066 241 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 CCND2P30279 289 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 MRPS9P82933 396 aaKnown RBP17.37■□□□□ 0.37
IFT43-211ENST00000555677 SP2Q02086 613 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 ARHGAP1Q07960 439 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 FUT2Q10981 343 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 LRIT3Q3SXY7 679 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 FBXL16Q8N461 479 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 SMARCC2Q8TAQ2 1214 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 AFG1LQ8WV93 481 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 BRF1Q92994 677 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 CUL5Q93034 780 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
IFT43-211ENST00000555677 PSTPIP2Q9H939 334 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 MRVI1Q9Y6F6 885 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 FRMPD4Q14CM0 1322 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 LAMA3Q16787 3333 aa17.37■□□□□ 0.37
IFT43-211ENST00000555677 GOLGA8AA7E2F4 631 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 B4GALT4O60513 344 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 KPNA6O60684 536 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
IFT43-211ENST00000555677 SHHQ15465 462 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 KCNV1Q6PIU1 500 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 AGXT2Q9BYV1 514 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 TRPV6Q9H1D0 765 aa17.36■□□□□ 0.37
IFT43-211ENST00000555677 NAP1L2Q9ULW6 460 aaPredicted RBP17.36■□□□□ 0.37
IFT43-211ENST00000555677 V9GY48 417 aaPredicted RBP17.36■□□□□ 0.37
IFT43-211ENST00000555677 MMP3P08254 477 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 TGFB3P10600 412 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 RCAN1P53805 252 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 NBPF20Q3BBV1 942 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 C9orf50Q5SZB4 431 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 RUFY3Q7L099 469 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 DHX37Q8IY37 1157 aaKnown RBP17.35■□□□□ 0.37
IFT43-211ENST00000555677 GPKOWQ92917 476 aaPredicted RBP eCLIP17.35■□□□□ 0.37
IFT43-211ENST00000555677 EMID1Q96A84 441 aaPredicted RBP17.35■□□□□ 0.37
IFT43-211ENST00000555677 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
IFT43-211ENST00000555677 TRIP12Q14669 1992 aaPredicted RBP17.35■□□□□ 0.37
IFT43-211ENST00000555677 METAP2P50579 478 aaKnown RBP eCLIP17.34■□□□□ 0.37
IFT43-211ENST00000555677 EPHB4P54760 987 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 LAMC2Q13753 1193 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 WWC2Q6AWC2 1192 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 MFSD5Q6N075 450 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 HEATR3Q7Z4Q2 680 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 PPP1R13LQ8WUF5 828 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
IFT43-211ENST00000555677 ZSWIM6Q9HCJ5 1215 aa17.34■□□□□ 0.37
IFT43-211ENST00000555677 SORBS3O60504 671 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 STAM2O75886 525 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 FPGSQ05932 587 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 DGKDQ16760 1214 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 UBE2SQ16763 222 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 CELF3Q5SZQ8 465 aaKnown RBP17.33■□□□□ 0.36
IFT43-211ENST00000555677 PCNX4Q63HM2 1172 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 TYW1BQ6NUM6 668 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 PPP1R12CQ9BZL4 782 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 BCAS3Q9H6U6 928 aa17.33■□□□□ 0.36
IFT43-211ENST00000555677 TRMT13Q9NUP7 481 aaKnown RBP17.33■□□□□ 0.36
IFT43-211ENST00000555677 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 GGPS1O95749 300 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 ICAM3P32942 547 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 CYP2C18P33260 490 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 EVCP57679 992 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 HSDL1Q3SXM5 330 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 NFRKBQ6P4R8 1299 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 KAT2BQ92831 832 aa17.32■□□□□ 0.36
IFT43-211ENST00000555677 INPP4AQ96PE3 977 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms