RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.27■■■□□ 2.12
PRKCH-216ENST00000555542 TRMT13Q9NUP7 481 aaKnown RBP28.27■■■□□ 2.12
PRKCH-216ENST00000555542 MMP3P08254 477 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 ACRP10323 421 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 CCND2P30279 289 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 ARHGAP1Q07960 439 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 PGM5Q15124 567 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 FAM109BQ6ICB4 259 aaPredicted RBP28.26■■■□□ 2.11
PRKCH-216ENST00000555542 PSRC1Q6PGN9 363 aaPredicted RBP28.26■■■□□ 2.11
PRKCH-216ENST00000555542 SYNE3Q6ZMZ3 975 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 RAB11FIP4Q86YS3 637 aa28.26■■■□□ 2.11
PRKCH-216ENST00000555542 DDX41Q9UJV9 622 aaKnown RBP28.26■■■□□ 2.11
PRKCH-216ENST00000555542 PLEKHA8P1O95397 391 aa28.25■■■□□ 2.11
PRKCH-216ENST00000555542 NEFLP07196 543 aa28.25■■■□□ 2.11
PRKCH-216ENST00000555542 CCL23P55773 120 aa28.25■■■□□ 2.11
PRKCH-216ENST00000555542 COL9A3Q14050 684 aaPredicted RBP28.25■■■□□ 2.11
PRKCH-216ENST00000555542 PPP1R13LQ8WUF5 828 aa28.25■■■□□ 2.11
PRKCH-216ENST00000555542 CUL5Q93034 780 aa28.25■■■□□ 2.11
PRKCH-216ENST00000555542 NEK1Q96PY6 1258 aa28.25■■■□□ 2.11
PRKCH-216ENST00000555542 NOC4LQ9BVI4 516 aaKnown RBP28.25■■■□□ 2.11
PRKCH-216ENST00000555542 SCN10AQ9Y5Y9 1956 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 UMODL1Q5DID0 1318 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 CASTP20810 708 aaKnown RBP28.24■■■□□ 2.11
PRKCH-216ENST00000555542 SMARCA1P28370 1054 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 NFRKBQ6P4R8 1299 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 MICU3Q86XE3 530 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 DHX37Q8IY37 1157 aaKnown RBP28.24■■■□□ 2.11
PRKCH-216ENST00000555542 CMTR1Q8N1G2 835 aaKnown RBP28.24■■■□□ 2.11
PRKCH-216ENST00000555542 SMARCC2Q8TAQ2 1214 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 IL23AQ9NPF7 189 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 NOD1Q9Y239 953 aa28.24■■■□□ 2.11
PRKCH-216ENST00000555542 CYP2C9P11712 490 aa28.23■■■□□ 2.11
PRKCH-216ENST00000555542 DGKDQ16760 1214 aa28.23■■■□□ 2.11
PRKCH-216ENST00000555542 TMEM240Q5SV17 173 aa28.23■■■□□ 2.11
PRKCH-216ENST00000555542 KCNV1Q6PIU1 500 aa28.23■■■□□ 2.11
PRKCH-216ENST00000555542 IL31RAQ8NI17 732 aa28.23■■■□□ 2.11
PRKCH-216ENST00000555542 MYH7BA7E2Y1 1941 aa28.22■■■□□ 2.11
PRKCH-216ENST00000555542 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.22■■■□□ 2.11
PRKCH-216ENST00000555542 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.22■■■□□ 2.11
PRKCH-216ENST00000555542 LAMC2Q13753 1193 aa28.22■■■□□ 2.11
PRKCH-216ENST00000555542 ZNF365Q70YC5 407 aa28.22■■■□□ 2.11
PRKCH-216ENST00000555542 VSIG10LQ86VR7 867 aa28.22■■■□□ 2.11
PRKCH-216ENST00000555542 SRBD1Q8N5C6 995 aaKnown RBP28.22■■■□□ 2.11
PRKCH-216ENST00000555542 ZFP91Q96JP5 570 aaPredicted RBP28.22■■■□□ 2.11
PRKCH-216ENST00000555542 STXBP5LQ9Y2K9 1186 aa28.22■■■□□ 2.11
PRKCH-216ENST00000555542 SORBS3O60504 671 aa28.21■■■□□ 2.11
PRKCH-216ENST00000555542 PTPN11Q06124 597 aaPredicted RBP28.21■■■□□ 2.11
PRKCH-216ENST00000555542 C16orf59Q7L2K0 433 aa28.21■■■□□ 2.11
PRKCH-216ENST00000555542 CCDC82Q8N4S0 544 aa28.21■■■□□ 2.11
PRKCH-216ENST00000555542 MTIF3Q9H2K0 278 aaKnown RBP28.21■■■□□ 2.11
PRKCH-216ENST00000555542 KRT32Q14532 448 aa28.2■■■□□ 2.1
PRKCH-216ENST00000555542 FANCBQ8NB91 859 aa28.2■■■□□ 2.1
PRKCH-216ENST00000555542 EMID1Q96A84 441 aaPredicted RBP28.2■■■□□ 2.1
PRKCH-216ENST00000555542 TCEANC2Q96MN5 208 aa28.2■■■□□ 2.1
PRKCH-216ENST00000555542 WNT8AQ9H1J5 351 aa28.2■■■□□ 2.1
PRKCH-216ENST00000555542 FGBP02675 491 aa28.19■■■□□ 2.1
PRKCH-216ENST00000555542 GNPTABQ3T906 1256 aa28.19■■■□□ 2.1
PRKCH-216ENST00000555542 SGMS1Q86VZ5 419 aa28.19■■■□□ 2.1
PRKCH-216ENST00000555542 RPUSD2Q8IZ73 545 aaKnown RBP28.19■■■□□ 2.1
PRKCH-216ENST00000555542 PPTC7Q8NI37 304 aa28.19■■■□□ 2.1
PRKCH-216ENST00000555542 SCLYQ96I15 445 aa28.19■■■□□ 2.1
PRKCH-216ENST00000555542 RGS20O76081 388 aa28.18■■■□□ 2.1
PRKCH-216ENST00000555542 GGPS1O95749 300 aa28.18■■■□□ 2.1
PRKCH-216ENST00000555542 FGD1P98174 961 aa28.18■■■□□ 2.1
PRKCH-216ENST00000555542 DHX32Q7L7V1 743 aaKnown RBP28.18■■■□□ 2.1
PRKCH-216ENST00000555542 SPATA33Q96N06 139 aa28.18■■■□□ 2.1
PRKCH-216ENST00000555542 GUCD1Q96NT3 240 aa28.18■■■□□ 2.1
PRKCH-216ENST00000555542 KATNAL1Q9BW62 490 aa28.18■■■□□ 2.1
PRKCH-216ENST00000555542 hCG_1642624A0A1W2PR95 340 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 ZNF286BP0CG31 522 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 TGFB3P10600 412 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 PTGISQ16647 500 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 ADCK5Q3MIX3 580 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 CELF3Q5SZQ8 465 aaKnown RBP28.17■■■□□ 2.1
PRKCH-216ENST00000555542 USP17L6PQ6QN14 398 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 TMTC3Q6ZXV5 915 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 RASEFQ8IZ41 740 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 RETREG2Q8NC44 543 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 ALG1Q9BT22 464 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 SEMA6BQ9H3T3 888 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 MLXIPQ9HAP2 919 aa28.17■■■□□ 2.1
PRKCH-216ENST00000555542 STAM2O75886 525 aa28.16■■■□□ 2.1
PRKCH-216ENST00000555542 UBA1P22314 1058 aaKnown RBP28.16■■■□□ 2.1
PRKCH-216ENST00000555542 APOA5Q6Q788 366 aa28.16■■■□□ 2.1
PRKCH-216ENST00000555542 OTOP2Q7RTS6 562 aa28.16■■■□□ 2.1
PRKCH-216ENST00000555542 C7orf31Q8N865 590 aa28.16■■■□□ 2.1
PRKCH-216ENST00000555542 RBM28Q9NW13 759 aaKnown RBP28.16■■■□□ 2.1
PRKCH-216ENST00000555542 RTEL1Q9NZ71 1219 aa28.16■■■□□ 2.1
PRKCH-216ENST00000555542 NAP1L2Q9ULW6 460 aaPredicted RBP28.16■■■□□ 2.1
PRKCH-216ENST00000555542 ZBTB43O43298 467 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 HMGB1P09429 215 aaKnown RBP28.15■■■□□ 2.1
PRKCH-216ENST00000555542 DNAJB2P25686 324 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 BFSP2Q13515 415 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 TSGA10IPQ3SY00 556 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 MYSM1Q5VVJ2 828 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 HEATR3Q7Z4Q2 680 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 DEFB128Q7Z7B8 93 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 CCDC155Q8N6L0 562 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 HERVK_113Q902F9 699 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 KAT2BQ92831 832 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms