RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CABP7Q86V35 215 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 OR6P1Q8NGX9 317 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 KISS1RQ969F8 398 aaPredicted RBP6.43□□□□□ -1.38
SNX6-204ENST00000555541 WWC2-AS2Q96NR7 200 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 BCL11AQ9H165 835 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 GPRC5CQ9NQ84 441 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 NUDT5Q9UKK9 219 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 EMC9Q9Y3B6 208 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 GPR42O15529 346 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 B4GALT3O60512 393 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 FUCA1P04066 466 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 GJA8P48165 433 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 INF2Q27J81 1249 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 GLB1LQ6UWU2 654 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 FAM26EQ8N5C1 309 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 FAM169BQ8N8A8 192 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 SPATA32Q96LK8 384 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 CLEC1BQ9P126 229 aa6.42□□□□□ -1.38
SNX6-204ENST00000555541 ING1Q9UK53 422 aaPredicted RBP6.42□□□□□ -1.38
SNX6-204ENST00000555541 NPHS1O60500 1241 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 AMHP03971 560 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 PLS3P13797 630 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 KIAA1211LQ6NV74 962 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 MIB1Q86YT6 1006 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 TXNDC5Q8NBS9 432 aaKnown RBP6.41□□□□□ -1.38
SNX6-204ENST00000555541 GPRASP2Q96D09 838 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 AKT3Q9Y243 479 aa6.41□□□□□ -1.38
SNX6-204ENST00000555541 TRBV23OR9-2A0A075B6M9 112 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 ANKRD34BA5PLL1 514 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.38
SNX6-204ENST00000555541 SMARCA5O60264 1052 aaPredicted RBP6.4□□□□□ -1.38
SNX6-204ENST00000555541 CYP2C8P10632 490 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 SCRN1Q12765 414 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 BORAQ6PGQ7 559 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 KYQ8NBH2 561 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 MBD6Q96DN6 1003 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 MRGPRX3Q96LB0 322 aa6.4□□□□□ -1.38
SNX6-204ENST00000555541 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
SNX6-204ENST00000555541 TGM1P22735 817 aa6.39□□□□□ -1.39
SNX6-204ENST00000555541 MCTP2Q6DN12 878 aa6.39□□□□□ -1.39
SNX6-204ENST00000555541 NPLOC4Q8TAT6 608 aa6.39□□□□□ -1.39
SNX6-204ENST00000555541 FRS2Q8WU20 508 aa6.39□□□□□ -1.39
SNX6-204ENST00000555541 LGR4Q9BXB1 951 aa6.39□□□□□ -1.39
SNX6-204ENST00000555541 KCNH1O95259 989 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 THBDP07204 575 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 NASPP49321 788 aaPredicted RBP6.38□□□□□ -1.39
SNX6-204ENST00000555541 VHLLQ6RSH7 139 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 USP51Q70EK9 711 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 Q8N1Y9 231 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 BVESQ8NE79 360 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 USP33Q8TEY7 942 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 CDK5RAP1Q96SZ6 601 aaKnown RBP6.38□□□□□ -1.39
SNX6-204ENST00000555541 CYP26B1Q9NR63 512 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 MARCH2Q9P0N8 246 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 TMEFF2Q9UIK5 374 aaPredicted RBP6.38□□□□□ -1.39
SNX6-204ENST00000555541 SUGT1Q9Y2Z0 365 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 ZNF536O15090 1300 aa6.38□□□□□ -1.39
SNX6-204ENST00000555541 ITGA1P56199 1179 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 HDLBPQ00341 1268 aaKnown RBP6.37□□□□□ -1.39
SNX6-204ENST00000555541 PPP2R5EQ16537 467 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 GTF2IRD2BQ6EKJ0 949 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 ETV3LQ6ZN32 361 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 GTF2IRD2Q86UP8 949 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 STK32CQ86UX6 486 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 TEX2Q8IWB9 1127 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 PCDH18Q9HCL0 1135 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.37□□□□□ -1.39
SNX6-204ENST00000555541 HS3ST3A1Q9Y663 406 aa6.37□□□□□ -1.39
SNX6-204ENST00000555541 C9orf118A6NHY6 69 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 CR1LQ2VPA4 569 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 FAM124AQ86V42 546 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 DCP2Q8IU60 420 aaKnown RBP6.36□□□□□ -1.39
SNX6-204ENST00000555541 CCDC103Q8IW40 242 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 APBA2Q99767 749 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 NKX2-4Q9H2Z4 354 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 X6R8D5 127 aa6.36□□□□□ -1.39
SNX6-204ENST00000555541 PATE3B3GLJ2 98 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 C22orf46C9J442 243 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 DDX3XO00571 662 aaKnown RBP eCLIP6.35□□□□□ -1.39
SNX6-204ENST00000555541 ZNF28P17035 718 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 SLC6A11P48066 632 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 ZNF143P52747 638 aaPredicted RBP6.35□□□□□ -1.39
SNX6-204ENST00000555541 EPHB4P54760 987 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 ADAM9Q13443 819 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 SURF1Q15526 300 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 PKN3Q6P5Z2 889 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 CD300LDQ6UXZ3 194 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 NLRP10Q86W26 655 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 NT5DC4Q86YG4 428 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 RIOX2Q8IUF8 465 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 FAM126BQ8IXS8 530 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 KREMEN2Q8NCW0 462 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 SEC14L1Q92503 715 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 SEC16BQ96JE7 1060 aa6.35□□□□□ -1.39
SNX6-204ENST00000555541 LCORQ96JN0 433 aaPredicted RBP6.35□□□□□ -1.39
SNX6-204ENST00000555541 CAPNS1P04632 268 aa6.34□□□□□ -1.39
SNX6-204ENST00000555541 FPR2P25090 351 aa6.34□□□□□ -1.39
SNX6-204ENST00000555541 TMCO4Q5TGY1 634 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms