RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 FBXL16Q8N461 479 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PDCD2LQ9BRP1 358 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 AGXT2Q9BYV1 514 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PSTPIP2Q9H939 334 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ALPK3Q96L96 1907 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TRIM43BA6NCK2 446 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PQBP1O60828 265 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MAGEA10P43363 369 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CDK7P50613 346 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PSMC6P62333 389 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MDM2Q00987 491 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 UBE2SQ16763 222 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 C1orf53Q5VUE5 145 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TYW1BQ6NUM6 668 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SMARCC2Q8TAQ2 1214 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TRIM43Q96BQ3 446 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 GLT1D1Q96MS3 346 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 GDF15Q99988 308 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TM6SF1Q9BZW5 370 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PRO3102Q9H379 93 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 NCOA5Q9HCD5 579 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 GRIN2DO15399 1336 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 RANBP2P49792 3224 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ARVCFO00192 962 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SORBS3O60504 671 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MYL3P08590 195 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SP2Q02086 613 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CUL5Q93034 780 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 BCAS3Q9H6U6 928 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PRDM5Q9NQX1 630 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ELP1O95163 1332 aa14.3□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 NKRFO15226 690 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ZEB2O60315 1214 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ITGB8P26012 769 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 RCAN1P53805 252 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 EVCP57679 992 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 FAAP100Q0VG06 881 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ITGA7Q13683 1181 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 AFG1LQ8WV93 481 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PHKBQ93100 1093 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PDLIM7Q9NR12 457 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MYH6P13533 1939 aa14.29□□□□□ -0.12
TRAPPC6B-205ENST00000555269 A0A0U1RQG5 324 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CCDC196A0A1B0GTZ2 297 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 A6NJR5 290 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 DCDC2CA8MYV0 355 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 STXBP3O00186 592 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ADAMTS3O15072 1205 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 DTNBO60941 627 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 GH1P01241 217 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CCND2P30279 289 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 NAPAP54920 295 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ARHGAP1Q07960 439 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 STK3Q13188 491 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 NTRK3Q16288 839 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PKN1Q16512 942 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 ANKRD33Q7Z3H0 272 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PRKAG2Q9UGJ0 569 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MRVI1Q9Y6F6 885 aa14.28□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SMCO2A6NFE2 343 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 PRPF3O43395 683 aaKnown RBP14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 CABYRO75952 493 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 CLTBP09497 229 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 CPT1AP50416 773 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 PURAQ00577 322 aaKnown RBP14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 BADQ92934 168 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 TMEM260Q9NX78 707 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 PCDHA6Q9UN73 950 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 PCDHA8Q9Y5H6 950 aa14.27□□□□□ -0.13
TRAPPC6B-205ENST00000555269 BMP8BP34820 402 aa14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 SEMA3FQ13275 785 aa14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 NBPF20Q3BBV1 942 aa14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 ZNF274Q96GC6 653 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 LBHD1Q9BQE6 289 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC6B-205ENST00000555269 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms