RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TGFBRAP1Q8WUH2 860 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 CCDC47Q96A33 483 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 ERGIC2Q96RQ1 377 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 TMEM47Q9BQJ4 181 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 RTFDC1Q9BY42 306 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 SBF2Q86WG5 1849 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 ATAD5Q96QE3 1844 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 BICDL2A1A5D9 508 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 IL1R1P14778 569 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 GNA11P29992 359 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 RDXP35241 583 aaKnown RBP11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 UBA7P41226 1012 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 NAP1L1P55209 391 aaKnown RBP11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 NEDD9Q14511 834 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 NFIXQ14938 502 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 TTMPQ5BVD1 217 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 PTF1AQ7RTS3 328 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 IFT20Q8IY31 132 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 ARFGAP2Q8N6H7 521 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 NEDD1Q8NHV4 660 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 TBC1D22AQ8WUA7 517 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 RBM17Q96I25 401 aaKnown RBP11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 LACRTQ9GZZ8 138 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 SH2D4AQ9H788 454 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 VCPKMTQ9H867 229 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 C6orf50Q9HD87 102 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 JAG2Q9Y219 1238 aa11.83□□□□□ -0.51
MTHFD1-210ENST00000555252 AFF2P51816 1311 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 FAM205AQ6ZU69 1335 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 hCG_1984214I3L0E3 225 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 PJA2O43164 708 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 RHOBTB3O94955 611 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 TRIM21P19474 475 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 GSPT2Q8IYD1 628 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 IQCKQ8N0W5 287 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 ZNF713Q8N859 430 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 MAGEC3Q8TD91 643 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 MTRQ99707 1265 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 LRRC1Q9BTT6 524 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 ZMYND12Q9H0C1 365 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
MTHFD1-210ENST00000555252 ZMYND10O75800 440 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 LSP1P33241 339 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 BTDP43251 543 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 CDK8P49336 464 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 ACTN3Q08043 901 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 PAK2Q13177 524 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 CCDC181Q5TID7 509 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 HAUS3Q68CZ6 603 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 PPP4R3AQ6IN85 833 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 RASSF8Q8NHQ8 419 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 STAMQ92783 540 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 P3H4Q92791 437 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 EYA3Q99504 573 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 DMGDHQ9UI17 866 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 GGA1Q9UJY5 639 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 ABCB11O95342 1321 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 KLRF2D3W0D1 207 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 ZNF185O15231 689 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 CYTH3O43739 400 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 PPP1R37O75864 691 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 BBOX1O75936 387 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 NOVP48745 357 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 GPSM2P81274 684 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 CRY2Q49AN0 593 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 PREPLQ4J6C6 727 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 CFAP58Q5T655 872 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 SOGA3Q5TF21 947 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 NAA35Q5VZE5 725 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 TTI2Q6NXR4 508 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 C8orf74Q6P047 294 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 ARMC9Q7Z3E5 817 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 RNF10Q8N5U6 811 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 GIMAP8Q8ND71 665 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 WHAMMQ8TF30 809 aa11.82□□□□□ -0.52
MTHFD1-210ENST00000555252 TRIM47Q96LD4 638 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms