RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 CAGE1Q8TC20 777 aa15.37■□□□□ 0.05
XRCC3-212ENST00000555231 SYTL5Q8TDW5 730 aaPredicted RBP15.37■□□□□ 0.05
XRCC3-212ENST00000555231 KHSRPQ92945 711 aaKnown RBP eCLIP15.37■□□□□ 0.05
XRCC3-212ENST00000555231 ALG1Q9BT22 464 aa15.37■□□□□ 0.05
XRCC3-212ENST00000555231 NEDD4P46934 1319 aa15.37■□□□□ 0.05
XRCC3-212ENST00000555231 SIP14410 1827 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 BRWD1Q9NSI6 2320 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 NBNO60934 754 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
XRCC3-212ENST00000555231 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 CNKSR3Q6P9H4 555 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 RGS22Q8NE09 1264 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 HDAC6Q9UBN7 1215 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 ZMYM6O95789 1325 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 CCDC171Q6TFL3 1326 aa15.36■□□□□ 0.05
XRCC3-212ENST00000555231 CKBP12277 381 aa15.35■□□□□ 0.05
XRCC3-212ENST00000555231 PSEN2P49810 448 aa15.35■□□□□ 0.05
XRCC3-212ENST00000555231 GPATCH4Q5T3I0 446 aaKnown RBP15.35■□□□□ 0.05
XRCC3-212ENST00000555231 SESTD1Q86VW0 696 aa15.35■□□□□ 0.05
XRCC3-212ENST00000555231 NSUN6Q8TEA1 469 aaKnown RBP15.35■□□□□ 0.05
XRCC3-212ENST00000555231 RMDN3Q96TC7 470 aa15.35■□□□□ 0.05
XRCC3-212ENST00000555231 GTF2IRD1Q9UHL9 959 aa15.35■□□□□ 0.05
XRCC3-212ENST00000555231 ABCB11O95342 1321 aa15.35■□□□□ 0.05
XRCC3-212ENST00000555231 LAMA4Q16363 1823 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 TRIM6-TRIM34B2RNG4 842 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 DHX16O60231 1041 aaKnown RBP15.34■□□□□ 0.05
XRCC3-212ENST00000555231 SORBS3O60504 671 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 CXCL10P02778 98 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 ZNF286BP0CG31 522 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 EIF2AK2P19525 551 aaKnown RBP15.34■□□□□ 0.05
XRCC3-212ENST00000555231 STXBP2Q15833 593 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 C7orf31Q8N865 590 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 PNMA1Q8ND90 353 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 ESR2Q92731 530 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 WNT8BQ93098 351 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 RILPL2Q969X0 211 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 SUGCTQ9HAC7 445 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 VAT1LQ9HCJ6 419 aa15.34■□□□□ 0.05
XRCC3-212ENST00000555231 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
XRCC3-212ENST00000555231 FAM86C2PA6NEL3 165 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 GJB5O95377 273 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 PCP11498 1178 aaKnown RBP15.33■□□□□ 0.04
XRCC3-212ENST00000555231 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
XRCC3-212ENST00000555231 RBL2Q08999 1139 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 MFSD10Q14728 455 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 DGKDQ16760 1214 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 QRICH1Q2TAL8 776 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 TMEM31Q5JXX7 168 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 ARHGEF16Q5VV41 709 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 RNF41Q9H4P4 317 aaPredicted RBP15.33■□□□□ 0.04
XRCC3-212ENST00000555231 CD320Q9NPF0 282 aa15.33■□□□□ 0.04
XRCC3-212ENST00000555231 ABHD14A-ACY1A0A1B0GW23 586 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 LINC01553A4QN01 128 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 B4E1Z4 1266 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 KDM4AO75164 1064 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 CFBP00751 764 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 ERVK-21P61565 698 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 MBTPS1Q14703 1052 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 KIAA0753Q2KHM9 967 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 TRIM71Q2Q1W2 868 aaKnown RBP15.32■□□□□ 0.04
XRCC3-212ENST00000555231 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 TRAF7Q6Q0C0 670 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 DGKHQ86XP1 1220 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 TGS1Q96RS0 853 aaKnown RBP15.32■□□□□ 0.04
XRCC3-212ENST00000555231 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 CRBNQ96SW2 442 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 RAD9AQ99638 391 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 KAT14Q9H8E8 782 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 LMCD1Q9NZU5 365 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 MRVI1Q9Y6F6 885 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 MICAL3Q7RTP6 2002 aa15.32■□□□□ 0.04
XRCC3-212ENST00000555231 HAS3O00219 553 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 ZNF213O14771 459 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
XRCC3-212ENST00000555231 NR3C2P08235 984 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 PTK7Q13308 1070 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 IKBKEQ14164 716 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 HIC1Q14526 733 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
XRCC3-212ENST00000555231 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 DHX37Q8IY37 1157 aaKnown RBP15.31■□□□□ 0.04
XRCC3-212ENST00000555231 KATNAL1Q9BW62 490 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 LNPKQ9C0E8 428 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 UBE2ZQ9H832 354 aaPredicted RBP15.31■□□□□ 0.04
XRCC3-212ENST00000555231 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 C11orf16Q9NQ32 467 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 MRPL11Q9Y3B7 192 aaKnown RBP15.31■□□□□ 0.04
XRCC3-212ENST00000555231 HCN4Q9Y3Q4 1203 aa15.31■□□□□ 0.04
XRCC3-212ENST00000555231 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
XRCC3-212ENST00000555231 F2P00734 622 aa15.3■□□□□ 0.04
XRCC3-212ENST00000555231 MYCLP12524 364 aaPredicted RBP15.3■□□□□ 0.04
XRCC3-212ENST00000555231 SDSP20132 328 aa15.3■□□□□ 0.04
XRCC3-212ENST00000555231 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
XRCC3-212ENST00000555231 LAMC2Q13753 1193 aa15.3■□□□□ 0.04
XRCC3-212ENST00000555231 ASPRV1Q53RT3 343 aa15.3■□□□□ 0.04
XRCC3-212ENST00000555231 EMID1Q96A84 441 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms