RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 IGSF3O75054 1194 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 LEFTY1O75610 366 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 GPTP24298 496 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 PRKAR2BP31323 418 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 TNNI2P48788 182 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 CDK8P49336 464 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 GP2P55259 537 aaKnown RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 RPS26P62854 115 aaKnown RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 CC2D1BQ5T0F9 858 aaKnown RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 ZBTB37Q5TC79 503 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 LRFN4Q6PJG9 635 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 DLK2Q6UY11 383 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 DUSP23Q9BVJ7 150 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 HDAC9Q9UKV0 1011 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 RRP7AQ9Y3A4 280 aaKnown RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 PCDHB5Q9Y5E4 795 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 OAS3Q9Y6K5 1087 aaKnown RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 MAP3K15Q6ZN16 1313 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 ABCC12Q96J65 1359 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-228ENST00000554592 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
ATXN3-228ENST00000554592 MINDY4BA8MYZ0 360 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 NTSR2O95665 410 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 RPS12P25398 132 aaKnown RBP6.38□□□□□ -1.39
ATXN3-228ENST00000554592 HABP4Q5JVS0 413 aaKnown RBP6.38□□□□□ -1.39
ATXN3-228ENST00000554592 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 MCM10Q7L590 875 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 RELL1Q8IUW5 271 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
ATXN3-228ENST00000554592 TMEM74Q96NL1 305 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 UTP14AQ9BVJ6 771 aaKnown RBP6.38□□□□□ -1.39
ATXN3-228ENST00000554592 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 NUDCQ9Y266 331 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 IBTKQ9P2D0 1353 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-228ENST00000554592 COL4A5P29400 1685 aa6.38□□□□□ -1.39
ATXN3-228ENST00000554592 RIC1Q4ADV7 1423 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 ABCC4O15439 1325 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 UBN2Q6ZU65 1347 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 SHTN1A0MZ66 631 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 YDJCA8MPS7 323 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 PSMD14O00487 310 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 FANCGO15287 622 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 WNT11O96014 354 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 RLBP1P12271 317 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 GBP2P32456 591 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-228ENST00000554592 LIG3P49916 1009 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 FKBP1BP68106 108 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 TBC1D10BQ4KMP7 808 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-228ENST00000554592 DDX46Q7L014 1031 aaKnown RBP6.37□□□□□ -1.39
ATXN3-228ENST00000554592 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATXN3-228ENST00000554592 PHC3Q8NDX5 983 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 MIS18AQ9NYP9 233 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 ADAMTS1Q9UHI8 967 aa6.37□□□□□ -1.39
ATXN3-228ENST00000554592 LTBP1Q14766 1721 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 GFRA2O00451 464 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 MYL6BP14649 208 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 TFE3P19532 575 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-228ENST00000554592 GRAPQ13588 217 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 PWP1Q13610 501 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 CYP27C1Q4G0S4 372 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 FBXO46Q6PJ61 603 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-228ENST00000554592 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-228ENST00000554592 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-228ENST00000554592 PLPPR2Q96GM1 343 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 RHOVQ96L33 236 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 CFAP53Q96M91 514 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 BSDC1Q9NW68 430 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-228ENST00000554592 INPP5FQ9Y2H2 1132 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 SCN7AQ01118 1682 aa6.36□□□□□ -1.39
ATXN3-228ENST00000554592 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 PF4P02776 101 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-228ENST00000554592 EIF4A3P38919 411 aaKnown RBP6.35□□□□□ -1.39
ATXN3-228ENST00000554592 TM4SF4P48230 202 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
ATXN3-228ENST00000554592 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-228ENST00000554592 PAK2Q13177 524 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 SEPT6Q14141 434 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
ATXN3-228ENST00000554592 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 CDCA5Q96FF9 252 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 HEXIM2Q96MH2 286 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms