RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 NELFCDQ8IXH7 590 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 CERKQ8TCT0 537 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 EIF3CLB5ME19 914 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 PPEF1O14829 653 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.383e-6■■□□□ 11.4
ARHGEF40-203ENST00000554514 ZNF543Q08ER8 600 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 TCP10Q12799 353 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 GPS2Q13227 327 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 HNRNPLLQ8WVV9 542 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 SECISBP2LQ93073 1101 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 ERGIC2Q96RQ1 377 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 EIF3CQ99613 913 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 STK17AQ9UEE5 414 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 TAF1LQ8IZX4 1826 aa17.43■□□□□ 0.38
ARHGEF40-203ENST00000554514 NPHP3-ACAD11A0A0J9YXS1 232 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 LRRC53A6NM62 1247 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 AKR1B10O60218 316 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 EIF4A3P38919 411 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 SNAP25P60880 206 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 C2orf54Q08AI8 447 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 ENOX2Q16206 610 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 IFIH1Q9BYX4 1025 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 NLRC4Q9NPP4 1024 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 ARHGAP20Q9P2F6 1191 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 ADAM21Q9UKJ8 722 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 PNMA6FA0A0J9YX94 578 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 MOCS3O95396 460 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 NFIAQ12857 509 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 ZSCAN29Q8IWY8 852 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 CCDC170Q8IYT3 715 aa17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-203ENST00000554514 LRRIQ3A6PVS8 624 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 E9PMD0 336 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 SMARCA1P28370 1054 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 GABPAQ06546 454 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 EHBP1Q8NDI1 1231 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 CUL5Q93034 780 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 FGFBP2Q9BYJ0 223 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 FAN1Q9Y2M0 1017 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 CAPN6Q9Y6Q1 641 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 PDE2AO00408 941 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 TRAF5O00463 557 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 KIF11P52732 1056 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 VAV2P52735 878 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 HNRNPH2P55795 449 aaKnown RBP17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 MAN2A1Q16706 1144 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 CACNA2D4Q7Z3S7 1137 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 ZFPM1Q8IX07 1006 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 CRACR2AQ9BSW2 395 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 NHSQ6T4R5 1651 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 EIF3JO75822 258 aaKnown RBP17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 CXCR5P32302 372 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 SHMT1P34896 483 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 PPP1R2P41236 205 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 DNA2P51530 1060 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 APBA1Q02410 837 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 HAS1Q92839 578 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 SMARCAL1Q9NZC9 954 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 PCDHA12Q9UN75 941 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 KIAA1024Q9UPX6 916 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 SIK3Q9Y2K2 1263 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 PCDHA13Q9Y5I0 950 aa17.41■□□□□ 0.38
ARHGEF40-203ENST00000554514 STAT3P40763 770 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 USP14P54578 494 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 COASYQ13057 564 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 TDRD12Q587J7 1177 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 TSG101Q99816 390 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 PVALEFA0A1B0GWK0 134 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 NAP1L1P55209 391 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 PAPD7Q5XG87 772 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 PANK4Q9NVE7 773 aa17.4■□□□□ 0.38
ARHGEF40-203ENST00000554514 POTEB3A0JP26 581 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 POTECB2RU33 542 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 ARID5AQ03989 594 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 CDC42EP5Q6NZY7 148 aa17.39■□□□□ 0.37
ARHGEF40-203ENST00000554514 POTEBQ6S5H4 581 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms