RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 BEND4Q6ZU67 534 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 C2CD4AQ8NCU7 369 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-212ENST00000554486 DCTPP1Q9H773 170 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 DISC1Q9NRI5 854 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 UBP1Q9NZI7 540 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 PCDHA4Q9UN74 947 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
SCFD1-212ENST00000554486 LRP5O75197 1615 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 DLEC1Q9Y238 1755 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 ANKRD18BA2A2Z9 1011 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 SRGNP10124 158 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 HOXA10P31260 410 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-212ENST00000554486 NTF4P34130 210 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 PDE6BP35913 854 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 USP11P51784 963 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 NFIAQ12857 509 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 PAK2Q13177 524 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 LRP8Q14114 963 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 SNAP47Q5SQN1 464 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 RNF43Q68DV7 783 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 SMC5Q8IY18 1101 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 PLPPR2Q96GM1 343 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 SPON2Q9BUD6 331 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 YIPF2Q9BWQ6 316 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 NT5C1AQ9BXI3 368 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 PUS3Q9BZE2 481 aaKnown RBP7.75□□□□□ -1.17
SCFD1-212ENST00000554486 SPON1Q9HCB6 807 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 RAD18Q9NS91 495 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 EXOC6BQ9Y2D4 811 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 CACNA1SQ13698 1873 aa7.75□□□□□ -1.17
SCFD1-212ENST00000554486 A0A1B0GUL6 1792 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 SLX4Q8IY92 1834 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 DCDC2CA8MYV0 355 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 SURF6O75683 361 aaKnown RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 NPR1P16066 1061 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CHRNA5P30532 468 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 GJA8P48165 433 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 GRAPQ13588 217 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 LRRC24Q50LG9 513 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 XP32Q5T750 250 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 DDX46Q7L014 1031 aaKnown RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CENPQQ7L2Z9 268 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 ATG9AQ7Z3C6 839 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 NBPF11Q86T75 865 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 C12orf40Q86WS4 652 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 C2CD5Q86YS7 1000 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 KIAA0825Q8IV33 1275 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 GIMAP7Q8NHV1 300 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 GRAPLQ8TC17 118 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 RPGRQ92834 1020 aaKnown RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CELF1Q92879 486 aaKnown RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CRAMP1Q96RY5 1269 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CDC5LQ99459 802 aaKnown RBP7.74□□□□□ -1.17
SCFD1-212ENST00000554486 TINF2Q9BSI4 451 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 LRRC3Q9BY71 257 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 SIL1Q9H173 461 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 C7orf69Q9H7B7 122 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 RIPOR2Q9Y4F9 1068 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 CSADQ9Y600 493 aa7.74□□□□□ -1.17
SCFD1-212ENST00000554486 BRCA1P38398 1863 aaKnown RBP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 HMX2A2RU54 273 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 H0YIN7 160 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 EYA2O00167 538 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 RAB11FIP3O75154 756 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 CIAO1O76071 339 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 SASH1O94885 1247 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 KCNA3P22001 575 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 MAP4P27816 1152 aaKnown RBP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 RPS8P62241 208 aaKnown RBP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 ID3Q02535 119 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 RPL6Q02878 288 aaKnown RBP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 G3BP1Q13283 466 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 TAF7LQ5H9L4 462 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 STYK1Q6J9G0 422 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 LDHAL6AQ6ZMR3 332 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 ANKRD18AQ8IVF6 992 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 GCC1Q96CN9 775 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 MASTLQ96GX5 879 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 RBM17Q96I25 401 aaKnown RBP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 FANCD2OSQ96PS1 177 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 DBNDD2Q9BQY9 259 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 FAM105AQ9NUU6 356 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 POLR3KQ9Y2Y1 108 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-212ENST00000554486 ACTL7BQ9Y614 415 aa7.73□□□□□ -1.17
SCFD1-212ENST00000554486 A0A0G2JLW4 131 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 TLR3O15455 904 aaKnown RBP7.72□□□□□ -1.17
SCFD1-212ENST00000554486 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-212ENST00000554486 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 DPEP1P16444 411 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 IGHMBP2P38935 993 aaKnown RBP7.72□□□□□ -1.17
SCFD1-212ENST00000554486 ERVK-24P63145 666 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 NUCB1Q02818 461 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-212ENST00000554486 ANKRD45Q5TZF3 282 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 ZNF622Q969S3 477 aaKnown RBP eCLIP7.72□□□□□ -1.17
SCFD1-212ENST00000554486 MPHOSPH8Q99549 860 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 CNNM1Q9NRU3 951 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms