RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 AFG1LQ8WV93 481 aa13.38□□□□□ -0.27
TMEM253-203ENST00000554329 PHKBQ93100 1093 aa13.38□□□□□ -0.27
TMEM253-203ENST00000554329 TSEN34Q9BSV6 310 aaKnown RBP13.38□□□□□ -0.27
TMEM253-203ENST00000554329 TRPV6Q9H1D0 765 aa13.38□□□□□ -0.27
TMEM253-203ENST00000554329 TMEM39AQ9NV64 488 aa13.38□□□□□ -0.27
TMEM253-203ENST00000554329 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
TMEM253-203ENST00000554329 PNMA2Q9UL42 364 aa13.38□□□□□ -0.27
TMEM253-203ENST00000554329 A0A0U1RQG5 324 aaPredicted RBP13.37□□□□□ -0.27
TMEM253-203ENST00000554329 MEIS2O14770 477 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 ZNF286BP0CG31 522 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 CALM1P0DP23 149 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 CALM2P0DP24 149 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 CALM3P0DP25 149 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 METAP2P50579 478 aaKnown RBP eCLIP13.37□□□□□ -0.27
TMEM253-203ENST00000554329 SP2Q02086 613 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 ARHGAP1Q07960 439 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 FUT2Q10981 343 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 STK3Q13188 491 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 ITGA7Q13683 1181 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 TOB2Q14106 344 aaPredicted RBP13.37□□□□□ -0.27
TMEM253-203ENST00000554329 TTLL4Q14679 1199 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 FAM47CQ5HY64 1035 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 ERICH6BQ5W0A0 696 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 CCDC62Q6P9F0 684 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 TMTC2Q8N394 836 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 SCFD2Q8WU76 684 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 UIMC1Q96RL1 719 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 MAP3K14Q99558 947 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
TMEM253-203ENST00000554329 TMEM260Q9NX78 707 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 PKD2L1Q9P0L9 805 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
TMEM253-203ENST00000554329 V9GY48 417 aaPredicted RBP13.37□□□□□ -0.27
TMEM253-203ENST00000554329 ARVCFO00192 962 aa13.36□□□□□ -0.27
TMEM253-203ENST00000554329 B4GALT4O60513 344 aa13.36□□□□□ -0.27
TMEM253-203ENST00000554329 MRPS9P82933 396 aaKnown RBP13.36□□□□□ -0.27
TMEM253-203ENST00000554329 PURAQ00577 322 aaKnown RBP13.36□□□□□ -0.27
TMEM253-203ENST00000554329 SP4Q02446 784 aa13.36□□□□□ -0.27
TMEM253-203ENST00000554329 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
TMEM253-203ENST00000554329 MPHOSPH6Q99547 160 aaKnown RBP13.36□□□□□ -0.27
TMEM253-203ENST00000554329 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
TMEM253-203ENST00000554329 MMP3P08254 477 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 ACRP10323 421 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 CYP2C9P11712 490 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 RAG1P15918 1043 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 CCND2P30279 289 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 CYP2C18P33260 490 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 GNAQP50148 359 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 CDK7P50613 346 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 NAPAP54920 295 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 CCL23P55773 120 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 GHRHRQ02643 423 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 SEMA3FQ13275 785 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 SHHQ15465 462 aa13.35□□□□□ -0.27
TMEM253-203ENST00000554329 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
TMEM253-203ENST00000554329 SCN5AQ14524 2016 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 DCDC2CA8MYV0 355 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 STXBP3O00186 592 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
TMEM253-203ENST00000554329 GGPS1O95749 300 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 GH1P01241 217 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
TMEM253-203ENST00000554329 NKX3-2P78367 333 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 RUFY3Q7L099 469 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 Q7L0L9 218 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 VSIG10LQ86VR7 867 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 TDHQ8IZJ6 230 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 IWS1Q96ST2 819 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 LZTS2Q9BRK4 669 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 PSTPIP2Q9H939 334 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
TMEM253-203ENST00000554329 ELP1O95163 1332 aa13.34□□□□□ -0.27
TMEM253-203ENST00000554329 SCN10AQ9Y5Y9 1956 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 B4DLN1 442 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 ZEB2O60315 1214 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
TMEM253-203ENST00000554329 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
TMEM253-203ENST00000554329 CPT1AP50416 773 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 MRPL12P52815 198 aaKnown RBP13.33□□□□□ -0.28
TMEM253-203ENST00000554329 HSDL1Q3SXM5 330 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 DHX37Q8IY37 1157 aaKnown RBP13.33□□□□□ -0.28
TMEM253-203ENST00000554329 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 KAT2BQ92831 832 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 CUL5Q93034 780 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 SCLYQ96I15 445 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 MTG1Q9BT17 334 aaPredicted RBP13.33□□□□□ -0.28
TMEM253-203ENST00000554329 SLC26A6Q9BXS9 759 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 TBX21Q9UL17 535 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 Q9Y3F1 56 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
TMEM253-203ENST00000554329 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
TMEM253-203ENST00000554329 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms