RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ARPP19P56211 112 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 RNASELQ05823 741 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 LRRC41Q15345 812 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SHHQ15465 462 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 CSPP1Q1MSJ5 1256 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KIAA0753Q2KHM9 967 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GNPTABQ3T906 1256 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 L1TD1Q5T7N2 865 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 PPP2R2DQ66LE6 453 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 LBX2Q6XYB7 198 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 C15orf52Q6ZUT6 534 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SESTD1Q86VW0 696 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 CDR2LQ86X02 465 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GPIHBP1Q8IV16 184 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TRMT2AQ8IZ69 625 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF654Q8IZM8 581 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TRAPPC12Q8WVT3 735 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MAML3Q96JK9 1138 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 NLRP4Q96MN2 994 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 IFIH1Q9BYX4 1025 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MROH8Q9H579 483 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 GJB4Q9NTQ9 266 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SETD4Q9NVD3 440 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 FBXO40Q9UH90 709 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MSRAQ9UJ68 235 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 FEM1BQ9UK73 627 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 KCNJ14Q9UNX9 436 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 MRPL11Q9Y3B7 192 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 R3HCC1Q9Y3T6 440 aaKnown RBP2.87□□□□□ -1.95
PRPF39-205ENST00000554081 SLC4A7Q9Y6M7 1214 aa2.87□□□□□ -1.95
PRPF39-205ENST00000554081 TTC41PQ6P2S7 1318 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 XIRP2A4UGR9 3374 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 FAM170AA1A519 330 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 SMCO2A6NFE2 343 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 ASB14A6NK59 587 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 E7EWF7 191 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 SEPT4O43236 478 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CDC45O75419 566 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 NR3C2P08235 984 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 SRGAP2CP0DJJ0 459 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CHMLP26374 656 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 FKBP1AP62942 108 aaKnown RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 ITGA7Q13683 1181 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 SAFBQ15424 915 aaKnown RBP eCLIP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 SF3A1Q15459 793 aaKnown RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 TTC22Q5TAA0 569 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 OLFML2BQ68BL8 750 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 C16orf86Q6ZW13 317 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CCDC83Q8IWF9 413 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 ENAHQ8N8S7 591 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 NEDD1Q8NHV4 660 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 NSUN6Q8TEA1 469 aaKnown RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 STAG1Q8WVM7 1258 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 RABGGTAQ92696 567 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 HINFPQ9BQA5 517 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 TRIM6Q9C030 488 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 GZF1Q9H116 711 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 ABHD16BQ9H3Z7 469 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CNNM2Q9H8M5 875 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CYP46A1Q9Y6A2 500 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 DLG5Q8TDM6 1919 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 TAF1LQ8IZX4 1826 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 UMODL1Q5DID0 1318 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 NCOR2Q9Y618 2525 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 TNRC6CQ9HCJ0 1690 aaKnown RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 SLC15A5A6NIM6 579 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 FGBP02675 491 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 XBP1P17861 261 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 FGFR4P22455 802 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 KCNA5P22460 613 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PDE4AP27815 886 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PBX3P40426 434 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 ACLYP53396 1101 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 OSTNP61366 133 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PTGISQ16647 500 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 NBPF20Q3BBV1 942 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 MTERF2Q49AM1 385 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CREB3L3Q68CJ9 461 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 FAM109BQ6ICB4 259 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PDXDC2PQ6P474 469 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 CYB5R4Q7L1T6 521 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 FAM160B2Q86V87 743 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PCSK9Q8NBP7 692 aaKnown RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PI4K2BQ8TCG2 481 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 ZBED3Q96IU2 234 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-205ENST00000554081 AIFM3Q96NN9 605 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 HELLSQ9NRZ9 838 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 PDRG1Q9NUG6 133 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM260Q9NX78 707 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 STK17AQ9UEE5 414 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 RREB1Q92766 1687 aa2.86□□□□□ -1.95
PRPF39-205ENST00000554081 LY75O60449 1722 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 DENND3A2RUS2 1198 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 DDX11L8A8MPP1 907 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NT5C1B-RDH14C9J2C7 533 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 CLTBP09497 229 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PDHBP11177 359 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 RBM10P98175 930 aaKnown RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 NUCB1Q02818 461 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms