RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CYP46A1Q9Y6A2 500 aa9.65□□□□□ -0.86
PSEN1-209ENST00000553855 SEPT4O43236 478 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 ZBTB43O43298 467 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 RARBP10826 455 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 AKR1A1P14550 325 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 CASTP20810 708 aaKnown RBP9.64□□□□□ -0.87
PSEN1-209ENST00000553855 SMARCA1P28370 1054 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 CCND3P30281 292 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-209ENST00000553855 VAC14Q08AM6 782 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 BAATQ14032 418 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-209ENST00000553855 PPP2R5BQ15173 497 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 QRICH1Q2TAL8 776 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 MUM1L1Q5H9M0 696 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 MAP3K21Q5TCX8 1036 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
PSEN1-209ENST00000553855 NECAB2Q7Z6G3 386 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 SGMS1Q86VZ5 419 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 STAG2Q8N3U4 1231 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 ARRDC4Q8NCT1 418 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 CUL5Q93034 780 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 WNT2BQ93097 391 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 MYL10Q9BUA6 226 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 CPVLQ9H3G5 476 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 ABHD16BQ9H3Z7 469 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 UPF2Q9HAU5 1272 aaKnown RBP9.64□□□□□ -0.87
PSEN1-209ENST00000553855 CYP39A1Q9NYL5 469 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 FAM184BQ9ULE4 1060 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 PCDHA1Q9Y5I3 950 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 PDE4DIPQ5VU43 2346 aa9.64□□□□□ -0.87
PSEN1-209ENST00000553855 RLFQ13129 1914 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 DNAJC25-GNG10A0A024R161 153 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 PNMA6FA0A0J9YX94 578 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 KLF18A0A0U1RQI7 1052 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 GOLGA8AA7E2F4 631 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 GOLGA8BA8MQT2 603 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 KBTBD13C9JR72 458 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 CFBP00751 764 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 CYBAP13498 195 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 EXOSC10Q01780 885 aaKnown RBP9.63□□□□□ -0.87
PSEN1-209ENST00000553855 AKAP17AQ02040 695 aaKnown RBP9.63□□□□□ -0.87
PSEN1-209ENST00000553855 PWP2Q15269 919 aaKnown RBP9.63□□□□□ -0.87
PSEN1-209ENST00000553855 RTN1Q16799 776 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 ADCK5Q3MIX3 580 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 MAMDC4Q6UXC1 1216 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 Q6ZUG5 572 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 ARMCX2Q7L311 632 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 CCDC144CPQ8IYA2 1237 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 SAMD3Q8N6K7 520 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 FANCBQ8NB91 859 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 KCNB2Q92953 911 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 TCEANC2Q96MN5 208 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 PIGSQ96S52 555 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 SPZ1Q9BXG8 430 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-209ENST00000553855 MAP3K20Q9NYL2 800 aaKnown RBP9.63□□□□□ -0.87
PSEN1-209ENST00000553855 PLXNB2O15031 1838 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 ZNF236Q9UL36 1845 aa9.63□□□□□ -0.87
PSEN1-209ENST00000553855 TNRC18O15417 2968 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-209ENST00000553855 GCOM1H8Y6P7 765 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-209ENST00000553855 NFIBO00712 420 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 RXRAP19793 462 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 METAP2P50579 478 aaKnown RBP eCLIP9.62□□□□□ -0.87
PSEN1-209ENST00000553855 RCAN1P53805 252 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 RPS6P62753 249 aaKnown RBP9.62□□□□□ -0.87
PSEN1-209ENST00000553855 CNTN2Q02246 1040 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 ACVR2BQ13705 512 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 PRAMEF19Q5SWL8 479 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 ARHGEF16Q5VV41 709 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 CPLX2Q6PUV4 134 aaKnown RBP9.62□□□□□ -0.87
PSEN1-209ENST00000553855 APOA5Q6Q788 366 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 RUFY3Q7L099 469 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 RNF180Q86T96 592 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 FAM133AQ8N9E0 248 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 DNERQ8NFT8 737 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 DPF3Q92784 378 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 BRF1Q92994 677 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 ALG2Q9H553 416 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 XPNPEP3Q9NQH7 507 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 OGDHLQ9ULD0 1010 aa9.62□□□□□ -0.87
PSEN1-209ENST00000553855 PARP14Q460N5 1801 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 RNF40O75150 1001 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 ALDH5A1P51649 535 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-209ENST00000553855 ANAPC15P60006 121 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 ANKRD1Q15327 319 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 SLC30A10Q6XR72 485 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 RAB11FIP4Q86YS3 637 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 ANKK1Q8NFD2 765 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 NSUN6Q8TEA1 469 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms