RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 RTN3O95197 1032 aaPredicted RBP11.1□□□□□ -0.63
CFAP54-204ENST00000553778 BAG3O95817 575 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 PDHBP11177 359 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 SARSP49591 514 aaKnown RBP11.1□□□□□ -0.63
CFAP54-204ENST00000553778 C1QTNF8P60827 252 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
CFAP54-204ENST00000553778 PNOCQ13519 176 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 PDIA5Q14554 519 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 ANKRD20A8PQ5CZ79 823 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 KLHL23Q8NBE8 558 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 EDC3Q96F86 508 aaKnown RBP11.1□□□□□ -0.63
CFAP54-204ENST00000553778 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 MMS19Q96T76 1030 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 CENPHQ9H3R5 247 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 TMOD2Q9NZR1 351 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 ZNF70Q9UC06 446 aaPredicted RBP11.1□□□□□ -0.63
CFAP54-204ENST00000553778 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
CFAP54-204ENST00000553778 AKAP11Q9UKA4 1901 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 CYP21A2P08686 494 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 FDPSP14324 419 aaKnown RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 BMP6P22004 513 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 MDH1P40925 334 aaKnown RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 TNNI2P48788 182 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 PDE4BQ07343 736 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 MORC3Q14149 939 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 BZW1Q7L1Q6 419 aaKnown RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 ZNF589Q86UQ0 364 aaPredicted RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 CCDC170Q8IYT3 715 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 MREGQ8N565 214 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 MAGEB6Q8N7X4 407 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 TRIM58Q8NG06 486 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 C8orf76Q96K31 380 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 GLIS2Q9BZE0 524 aaPredicted RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 USP40Q9NVE5 1235 aa11.09□□□□□ -0.63
CFAP54-204ENST00000553778 ADD3Q9UEY8 706 aaKnown RBP11.09□□□□□ -0.63
CFAP54-204ENST00000553778 GPR75-ASB3A0A0A6YYF3 556 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 HMGB1P1B2RPK0 211 aaPredicted RBP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 CYP7A1P22680 504 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 PDIA3P30101 505 aaKnown RBP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 BTDP43251 543 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 PLCD1P51178 756 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 IFT88Q13099 833 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 TNFAIP1Q13829 316 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 KCNB1Q14721 858 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SND1Q7KZF4 910 aaKnown RBP eCLIP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 PARD3BQ8TEW8 1205 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ZNF384Q8TF68 577 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ZFAND2BQ8WV99 257 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 CUL5Q93034 780 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 GAKO14976 1311 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 A0A0U1RQJ8 604 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 LUC7L3O95232 432 aaKnown RBP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ATP6V1G2O95670 118 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 PRLRP16471 622 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 CDC42EP5Q6NZY7 148 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 FOXP4Q8IVH2 680 aaPredicted RBP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ATRIPQ8WXE1 791 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ARL8AQ96BM9 186 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SLC39A2Q9NP94 309 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ABHD10Q9NUJ1 306 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 MAN1B1Q9UKM7 699 aa11.08□□□□□ -0.64
CFAP54-204ENST00000553778 SCAF8Q9UPN6 1271 aaKnown RBP11.08□□□□□ -0.64
CFAP54-204ENST00000553778 ADAMTSL1Q8N6G6 1762 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 TCP10L2B9ZVM9 353 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 ADM5C9JUS6 153 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 GYPCP04921 128 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 GSTA1P08263 222 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 FERP16591 822 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 CDC27P30260 824 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 KIF23Q02241 960 aaPredicted RBP11.07□□□□□ -0.64
CFAP54-204ENST00000553778 TBC1D25Q3MII6 688 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.07□□□□□ -0.64
CFAP54-204ENST00000553778 RPUSD2Q8IZ73 545 aaKnown RBP11.07□□□□□ -0.64
CFAP54-204ENST00000553778 IQCKQ8N0W5 287 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 KBTBD3Q8NAB2 608 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 ACRBPQ8NEB7 543 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
CFAP54-204ENST00000553778 SPATA20Q8TB22 786 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 CYFIP2Q96F07 1278 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
CFAP54-204ENST00000553778 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
CFAP54-204ENST00000553778 IRAK4Q9NWZ3 460 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms