RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 BACH2Q9BYV9 841 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 SPC25Q9HBM1 224 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 Q9Y3F1 56 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
TMEM253-202ENST00000553744 MYADML2A6NDP7 307 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 SPDYE3A6NKU9 549 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
TMEM253-202ENST00000553744 C6orf222P0C671 652 aaPredicted RBP13.63□□□□□ -0.23
TMEM253-202ENST00000553744 PTGS1P23219 599 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 CCDC148Q8NFR7 591 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 HTATIP2Q9BUP3 242 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 ZMYND12Q9H0C1 365 aa13.63□□□□□ -0.23
TMEM253-202ENST00000553744 RANBP2P49792 3224 aaKnown RBP13.63□□□□□ -0.23
TMEM253-202ENST00000553744 CTAGE5O15320 804 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 STAM2O75886 525 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 RGS20O76081 388 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 ARIH2O95376 493 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
TMEM253-202ENST00000553744 CLK2P49760 499 aaKnown RBP13.62□□□□□ -0.23
TMEM253-202ENST00000553744 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
TMEM253-202ENST00000553744 AP3B2Q13367 1082 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 PCNX4Q63HM2 1172 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
TMEM253-202ENST00000553744 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 CCDC62Q6P9F0 684 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 TSEN34Q9BSV6 310 aaKnown RBP13.62□□□□□ -0.23
TMEM253-202ENST00000553744 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
TMEM253-202ENST00000553744 AP5M1Q9H0R1 490 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 EHMT1Q9H9B1 1298 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 VPS54Q9P1Q0 977 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 LIMCH1Q9UPQ0 1083 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
TMEM253-202ENST00000553744 KIAA1217Q5T5P2 1943 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 MOXD2PA6NHM9 499 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 DYNC1LI2O43237 492 aaPredicted RBP13.61□□□□□ -0.23
TMEM253-202ENST00000553744 FOSP01100 380 aaPredicted RBP13.61□□□□□ -0.23
TMEM253-202ENST00000553744 GNA11P29992 359 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
TMEM253-202ENST00000553744 ST3GAL1Q11201 340 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 KCNA10Q16322 511 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 FSCN1Q16658 493 aaKnown RBP13.61□□□□□ -0.23
TMEM253-202ENST00000553744 PCSK9Q8NBP7 692 aaKnown RBP13.61□□□□□ -0.23
TMEM253-202ENST00000553744 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 OR6J1Q8NGC5 347 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 INPP4AQ96PE3 977 aaPredicted RBP13.61□□□□□ -0.23
TMEM253-202ENST00000553744 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 C6orf50Q9HD87 102 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
TMEM253-202ENST00000553744 A0A1W2PQ45 241 aaPredicted RBP13.6□□□□□ -0.23
TMEM253-202ENST00000553744 A0A1W2PQY0 241 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 ASGR1P07306 291 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 ACLYP53396 1101 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 BEX3Q00994 111 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 LY6KQ17RY6 165 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 GNPTABQ3T906 1256 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 GNASQ5JWF2 1037 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
TMEM253-202ENST00000553744 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
TMEM253-202ENST00000553744 BICD2Q8TD16 824 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 COPS5Q92905 334 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
TMEM253-202ENST00000553744 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
TMEM253-202ENST00000553744 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
TMEM253-202ENST00000553744 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ST18O60284 1047 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ZEB2O60315 1214 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 GH1P01241 217 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 TGFB3P10600 412 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ICAM3P32942 547 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 SREBF1P36956 1147 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 CPT1AP50416 773 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-202ENST00000553744 NLRP5P59047 1200 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 LRRC26Q2I0M4 334 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 JAKMIP3Q5VZ66 844 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
TMEM253-202ENST00000553744 DPF3Q92784 378 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 FERMT2Q96AC1 680 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-202ENST00000553744 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-202ENST00000553744 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-202ENST00000553744 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-202ENST00000553744 ALPK3Q96L96 1907 aa13.58□□□□□ -0.23
TMEM253-202ENST00000553744 FIBPO43427 364 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms