RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
APEX1-206ENST00000553681 BDP1A6H8Y1 2624 aa13.18□□□□□ -0.3
APEX1-206ENST00000553681 DOCK5Q9H7D0 1870 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 GH1P01241 217 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
APEX1-206ENST00000553681 BFSP2Q13515 415 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 AAMPQ13685 434 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 LRRC8DQ7L1W4 858 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.39e-8■■■□□ 15.2
APEX1-206ENST00000553681 OSBPL7Q9BZF2 842 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
APEX1-206ENST00000553681 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
APEX1-206ENST00000553681 CSPG5O95196 566 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 CFBP00751 764 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 CKBP12277 381 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 SELPP16109 830 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
APEX1-206ENST00000553681 RFC2P35250 354 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 PSEN2P49810 448 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 ARHGEF16Q5VV41 709 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 CWC27Q6UX04 472 aaKnown RBP13.16□□□□□ -0.3
APEX1-206ENST00000553681 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
APEX1-206ENST00000553681 DNERQ8NFT8 737 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 HLA-CQ95604 372 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 RMDN3Q96TC7 470 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 RWDD1Q9H446 243 aaPredicted RBP13.16□□□□□ -0.3
APEX1-206ENST00000553681 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 MYO7AQ13402 2215 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
APEX1-206ENST00000553681 SDSP20132 328 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 PLA2G5P39877 138 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 MFSD10Q14728 455 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 KIAA0753Q2KHM9 967 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 C7orf31Q8N865 590 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 PIBF1Q8WXW3 757 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 ESR2Q92731 530 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 MPHOSPH6Q99547 160 aaKnown RBP13.15□□□□□ -0.3
APEX1-206ENST00000553681 C17orf80Q9BSJ5 609 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 LRFN3Q9BTN0 628 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 SUGCTQ9HAC7 445 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 TRANK1O15050 2925 aa13.15□□□□□ -0.3
APEX1-206ENST00000553681 SIP14410 1827 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 LINC01553A4QN01 128 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 OPLAHO14841 1288 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 KPNA6O60684 536 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 PPP1R11O60927 126 aaPredicted RBP13.14□□□□□ -0.31
APEX1-206ENST00000553681 CTSHP09668 335 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 STXBP2Q15833 593 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 AAK1Q2M2I8 961 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
APEX1-206ENST00000553681 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 NSUN6Q8TEA1 469 aaKnown RBP13.14□□□□□ -0.31
APEX1-206ENST00000553681 IL25Q9H293 177 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 JMJD4Q9H9V9 463 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 GTF2IRD1Q9UHL9 959 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 DDX41Q9UJV9 622 aaKnown RBP13.14□□□□□ -0.31
APEX1-206ENST00000553681 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
APEX1-206ENST00000553681 ABCB11O95342 1321 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 ZNF213O14771 459 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 RGS20O76081 388 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 NR3C2P08235 984 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
APEX1-206ENST00000553681 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
APEX1-206ENST00000553681 DGKDQ16760 1214 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
APEX1-206ENST00000553681 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
APEX1-206ENST00000553681 CNKSR3Q6P9H4 555 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 EP400NLQ6ZTU2 488 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 SMC5Q8IY18 1101 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
APEX1-206ENST00000553681 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 AFAP1L1Q8TED9 768 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 TTC14Q96N46 770 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
APEX1-206ENST00000553681 C11orf16Q9NQ32 467 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
APEX1-206ENST00000553681 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms