RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 IL31RAQ8NI17 732 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 U2AF1L4Q8WU68 220 aaKnown RBP15.82■□□□□ 0.12
TUBB3-202ENST00000553656 PGBD1Q96JS3 809 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 PHF20Q9BVI0 1012 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 KATNBL1Q9H079 304 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 SPC25Q9HBM1 224 aa15.82■□□□□ 0.12
TUBB3-202ENST00000553656 HTTP42858 3142 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 SGPL1O95470 568 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 KRT2P35908 639 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 ZNF76P36508 570 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 SOX10P56693 466 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 TTLL4Q14679 1199 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 NLRX1Q86UT6 975 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 RASGRP4Q8TDF6 673 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 SHISA4Q96DD7 197 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 WDR11Q9BZH6 1224 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 GJB4Q9NTQ9 266 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 MRVI1Q9Y6F6 885 aa15.81■□□□□ 0.12
TUBB3-202ENST00000553656 CCDC194A0A1B0GVG4 234 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 DUSP11O75319 330 aaKnown RBP15.8■□□□□ 0.12
TUBB3-202ENST00000553656 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
TUBB3-202ENST00000553656 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
TUBB3-202ENST00000553656 TXNP10599 105 aaKnown RBP15.8■□□□□ 0.12
TUBB3-202ENST00000553656 GJB2P29033 226 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 SREBF1P36956 1147 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 CUL4AQ13619 759 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 KRT40Q6A162 431 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 KRT25Q7Z3Z0 450 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 RTEL1Q9NZ71 1219 aa15.8■□□□□ 0.12
TUBB3-202ENST00000553656 RBM47A0AV96 593 aaKnown RBP15.79■□□□□ 0.12
TUBB3-202ENST00000553656 POTEFA5A3E0 1075 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 NKRFO15226 690 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■□□□□ 10.7
TUBB3-202ENST00000553656 MMP1P03956 469 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 ARHGAP4P98171 946 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 GUCY1B3Q02153 619 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 GNL2Q13823 731 aaKnown RBP15.79■□□□□ 0.12
TUBB3-202ENST00000553656 LHX8Q68G74 356 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 ARRDC4Q8NCT1 418 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 LENG1Q96BZ8 264 aaPredicted RBP15.79■□□□□ 0.12
TUBB3-202ENST00000553656 ZFP91Q96JP5 570 aaPredicted RBP15.79■□□□□ 0.12
TUBB3-202ENST00000553656 CDHR1Q96JP9 859 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 CRISPLD2Q9H0B8 497 aa15.79■□□□□ 0.12
TUBB3-202ENST00000553656 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-202ENST00000553656 H3BQV1 296 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 FIBPO43427 364 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 CAPN15O75808 1086 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 SMPD1P17405 629 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 MRPS9P82933 396 aaKnown RBP15.78■□□□□ 0.12
TUBB3-202ENST00000553656 NONOQ15233 471 aaKnown RBP eCLIP15.78■□□□□ 0.12
TUBB3-202ENST00000553656 DUSP28Q4G0W2 176 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 RNF180Q86T96 592 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 TLK2Q86UE8 772 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
TUBB3-202ENST00000553656 INTS4Q96HW7 963 aaKnown RBP15.78■□□□□ 0.12
TUBB3-202ENST00000553656 INPP4AQ96PE3 977 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-202ENST00000553656 OGDHLQ9ULD0 1010 aa15.78■□□□□ 0.12
TUBB3-202ENST00000553656 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 KBTBD13C9JR72 458 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 ADAMTS3O15072 1205 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 PGK1P00558 417 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 C6orf222P0C671 652 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-202ENST00000553656 TGFB3P10600 412 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 EN2P19622 333 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-202ENST00000553656 MTMR1Q13613 665 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 NPY5RQ15761 445 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 BRDTQ58F21 947 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-202ENST00000553656 ANKLE1Q8NAG6 615 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 FBXO18Q8NFZ0 1043 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 OR6J1Q8NGC5 347 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 GPRASP2Q96D09 838 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 Q9Y3F1 56 aa15.77■□□□□ 0.12
TUBB3-202ENST00000553656 M0R2N6 131 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 DNM1LO00429 736 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 DYNC1LI2O43237 492 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-202ENST00000553656 ADCY6O43306 1168 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 FARP2O94887 1054 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-202ENST00000553656 GH1P01241 217 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 CYP3A4P08684 503 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 PDCP20941 246 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 ICAM3P32942 547 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 BECN1Q14457 450 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 LY6KQ17RY6 165 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 PIK3AP1Q6ZUJ8 805 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 OXER1Q8TDS5 423 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 TBCKQ8TEA7 893 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 MXRA8Q9BRK3 442 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 JADE2Q9NQC1 790 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 DDX41Q9UJV9 622 aaKnown RBP15.76■□□□□ 0.11
TUBB3-202ENST00000553656 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
TUBB3-202ENST00000553656 UBIAD1Q9Y5Z9 338 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 KIAA1217Q5T5P2 1943 aa15.76■□□□□ 0.11
TUBB3-202ENST00000553656 FRMPD3Q5JV73 1810 aa15.75■□□□□ 0.11
TUBB3-202ENST00000553656 BTBD18B2RXH4 712 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms