RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 ARHGAP1Q07960 439 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 PGM5Q15124 567 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 FAM47CQ5HY64 1035 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 SGMS1Q86VZ5 419 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 PPP1R13LQ8WUF5 828 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
CCNK-202ENST00000553636 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 MYH7BA7E2Y1 1941 aa13.42□□□□□ -0.26
CCNK-202ENST00000553636 hCG_1642624A0A1W2PR95 340 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 A6NJR5 290 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 B4GALT4O60513 344 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 SMARCA1P28370 1054 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 CCND2P30279 289 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 CYP2C18P33260 490 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 KRT32Q14532 448 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 APOA5Q6Q788 366 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 TMTC3Q6ZXV5 915 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 Q7L0L9 218 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
CCNK-202ENST00000553636 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 AFG1LQ8WV93 481 aa13.41□□□□□ -0.26
CCNK-202ENST00000553636 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
CCNK-202ENST00000553636 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 SORBS3O60504 671 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 KPNA6O60684 536 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 MMP3P08254 477 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 CPA1P15085 419 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 EXOSC10Q01780 885 aaKnown RBP13.4□□□□□ -0.26
CCNK-202ENST00000553636 TSGA10IPQ3SY00 556 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 VSIG10LQ86VR7 867 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
CCNK-202ENST00000553636 HIPK3Q9H422 1215 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
CCNK-202ENST00000553636 DDX41Q9UJV9 622 aaKnown RBP13.4□□□□□ -0.26
CCNK-202ENST00000553636 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 NAP1L2Q9ULW6 460 aaPredicted RBP13.4□□□□□ -0.26
CCNK-202ENST00000553636 DOCK5Q9H7D0 1870 aa13.4□□□□□ -0.26
CCNK-202ENST00000553636 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 KLF18A0A0U1RQI7 1052 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 ZBTB43O43298 467 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 RGS20O76081 388 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 CSF2RAP15509 400 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 FGD1P98174 961 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 PPIGQ13427 754 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCNK-202ENST00000553636 RTN1Q16799 776 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 NBPF20Q3BBV1 942 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 TMEM199Q8N511 208 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 CUL5Q93034 780 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 JAKMIP1Q96N16 626 aaKnown RBP13.39□□□□□ -0.27
CCNK-202ENST00000553636 FRMPD4Q14CM0 1322 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
CCNK-202ENST00000553636 LAMA3Q16787 3333 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 TANC1Q9C0D5 1861 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 REC8O95072 547 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
CCNK-202ENST00000553636 ACRP10323 421 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 CYP2C9P11712 490 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 HSPA4P34932 840 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 CCL23P55773 120 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 HEATR3Q7Z4Q2 680 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
CCNK-202ENST00000553636 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
CCNK-202ENST00000553636 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCNK-202ENST00000553636 NOC4LQ9BVI4 516 aaKnown RBP13.38□□□□□ -0.27
CCNK-202ENST00000553636 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
CCNK-202ENST00000553636 SNX14Q9Y5W7 946 aa13.38□□□□□ -0.27
CCNK-202ENST00000553636 MEIS2O14770 477 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 GGPS1O95749 300 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 ZNF286BP0CG31 522 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
CCNK-202ENST00000553636 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
CCNK-202ENST00000553636 MRPS9P82933 396 aaKnown RBP13.37□□□□□ -0.27
CCNK-202ENST00000553636 LAMC2Q13753 1193 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 DGKDQ16760 1214 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 UBE2SQ16763 222 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 KCNB2Q92953 911 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
CCNK-202ENST00000553636 WNT8AQ9H1J5 351 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 RTEL1Q9NZ71 1219 aa13.37□□□□□ -0.27
CCNK-202ENST00000553636 SCN5AQ14524 2016 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 PIK3CDO00329 1044 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 SUPT20HL2P0C7V6 817 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 SP2Q02086 613 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 APOBRQ0VD83 1088 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 GNPTABQ3T906 1256 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms