RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TRIM22Q8IYM9 498 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 CCDC12Q8WUD4 166 aaPredicted RBP21.2■□□□□ 0.98
CPSF2-202ENST00000553427 DPF3Q92784 378 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 LARP6Q9BRS8 491 aaKnown RBP21.2■□□□□ 0.98
CPSF2-202ENST00000553427 NR2E3Q9Y5X4 410 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 DYNC1LI2O43237 492 aaPredicted RBP21.19■□□□□ 0.98
CPSF2-202ENST00000553427 EVI5O60447 810 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 CDKL5O76039 1030 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 RGS20O76081 388 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 TXNP10599 105 aaKnown RBP21.19■□□□□ 0.98
CPSF2-202ENST00000553427 LRRC26Q2I0M4 334 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 TMEM63BQ5T3F8 832 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 PCNX4Q63HM2 1172 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 KCNV1Q6PIU1 500 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
CPSF2-202ENST00000553427 INPP4AQ96PE3 977 aaPredicted RBP21.19■□□□□ 0.98
CPSF2-202ENST00000553427 KIF2CQ99661 725 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 SLC26A6Q9BXS9 759 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 SLKQ9H2G2 1235 aaPredicted RBP21.19■□□□□ 0.98
CPSF2-202ENST00000553427 CEP290O15078 2479 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 KIAA1217Q5T5P2 1943 aa21.19■□□□□ 0.98
CPSF2-202ENST00000553427 SPDYE3A6NKU9 549 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 ZEB2O60315 1214 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 ARIH2O95376 493 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 FOSP01100 380 aaPredicted RBP21.18■□□□□ 0.98
CPSF2-202ENST00000553427 TGFB3P10600 412 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
CPSF2-202ENST00000553427 SCRN1Q12765 414 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 AP3B2Q13367 1082 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 UBE2SQ16763 222 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 SLC39A5Q6ZMH5 540 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 SEPT14Q6ZU15 432 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 IL27Q8NEV9 243 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 EMID1Q96A84 441 aaPredicted RBP21.18■□□□□ 0.98
CPSF2-202ENST00000553427 ZMYND12Q9H0C1 365 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 EHMT1Q9H9B1 1298 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 UPF2Q9HAU5 1272 aaKnown RBP21.18■□□□□ 0.98
CPSF2-202ENST00000553427 SH3GLB2Q9NR46 395 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 ELP1O95163 1332 aa21.18■□□□□ 0.98
CPSF2-202ENST00000553427 SMCO2A6NFE2 343 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 CABYRO75952 493 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 DEXIO95424 95 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 ASGR1P07306 291 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 CLK2P49760 499 aaKnown RBP21.17■□□□□ 0.98
CPSF2-202ENST00000553427 CPT1AP50416 773 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 IRX5P78411 483 aaPredicted RBP21.17■□□□□ 0.98
CPSF2-202ENST00000553427 MRPS9P82933 396 aaKnown RBP21.17■□□□□ 0.98
CPSF2-202ENST00000553427 SSRP1Q08945 709 aaKnown RBP21.17■□□□□ 0.98
CPSF2-202ENST00000553427 STK3Q13188 491 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 GNPTABQ3T906 1256 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 MCTP2Q6DN12 878 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 CCDC148Q8NFR7 591 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 OR6J1Q8NGC5 347 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 GLT1D1Q96MS3 346 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 DDX41Q9UJV9 622 aaKnown RBP21.17■□□□□ 0.98
CPSF2-202ENST00000553427 MRVI1Q9Y6F6 885 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 STK36Q9NRP7 1315 aa21.17■□□□□ 0.98
CPSF2-202ENST00000553427 A6NJR5 290 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 PTGS1P23219 599 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 ICAM3P32942 547 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 BEX3Q00994 111 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 ARHGAP1Q07960 439 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 BRDTQ58F21 947 aaPredicted RBP21.16■□□□□ 0.98
CPSF2-202ENST00000553427 FERMT2Q96AC1 680 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 PCDHA6Q9UN73 950 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 PCDHA8Q9Y5H6 950 aa21.16■□□□□ 0.98
CPSF2-202ENST00000553427 GH1P01241 217 aa21.15■□□□□ 0.98
CPSF2-202ENST00000553427 GNA11P29992 359 aa21.15■□□□□ 0.98
CPSF2-202ENST00000553427 ATN1P54259 1190 aaPredicted RBP21.15■□□□□ 0.98
CPSF2-202ENST00000553427 RTP1P59025 263 aa21.15■□□□□ 0.98
CPSF2-202ENST00000553427 GTF3C6Q969F1 213 aa21.15■□□□□ 0.98
CPSF2-202ENST00000553427 C6orf50Q9HD87 102 aa21.15■□□□□ 0.98
CPSF2-202ENST00000553427 STARD7Q9NQZ5 370 aa21.15■□□□□ 0.98
CPSF2-202ENST00000553427 KPNA6O60684 536 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 ME3Q16798 604 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 LY6KQ17RY6 165 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 C7orf61Q8IZ16 206 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 BICD2Q8TD16 824 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 COPS5Q92905 334 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 SEZ6LQ9BYH1 1024 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 POLR3EQ9NVU0 708 aa21.14■□□□□ 0.97
CPSF2-202ENST00000553427 SPATA31C2B4DYI2 1134 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 H0YGN5 161 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 FIBPO43427 364 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 SREBF1P36956 1147 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 LAMC2Q13753 1193 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 RABEP1Q15276 862 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 REXO1Q8N1G1 1221 aaKnown RBP21.13■□□□□ 0.97
CPSF2-202ENST00000553427 GPRASP2Q96D09 838 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 ANO3Q9BYT9 981 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 LIMCH1Q9UPQ0 1083 aa21.13■□□□□ 0.97
CPSF2-202ENST00000553427 A0A0U1RQG5 324 aaPredicted RBP21.12■□□□□ 0.97
CPSF2-202ENST00000553427 LARGE1O95461 756 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 UBA1P22314 1058 aaKnown RBP21.12■□□□□ 0.97
CPSF2-202ENST00000553427 SEMA3FQ13275 785 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 TRIM60Q495X7 471 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 CXCL17Q6UXB2 119 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 ANKRD33Q7Z3H0 272 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 NLRX1Q86UT6 975 aa21.12■□□□□ 0.97
CPSF2-202ENST00000553427 SLC43A3Q8NBI5 491 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms