RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 NPY5RQ15761 445 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 UBE2SQ16763 222 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 SLC30A10Q6XR72 485 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 FCHSD1Q86WN1 690 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 SYTL5Q8TDW5 730 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-204ENST00000553335 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
TMEM260-204ENST00000553335 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
TMEM260-204ENST00000553335 ADD3Q9UEY8 706 aaKnown RBP11.12□□□□□ -0.63
TMEM260-204ENST00000553335 DOCK3Q8IZD9 2030 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 CASP8AP2Q9UKL3 1982 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 BRD1O95696 1058 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 F13A1P00488 732 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 HSPA8P11142 646 aaKnown RBP11.11□□□□□ -0.63
TMEM260-204ENST00000553335 U2AF2P26368 475 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM260-204ENST00000553335 HOXD10P28358 340 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 DDIT3P35638 169 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 PSMC4P43686 418 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 NR5A1Q13285 461 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 GRB14Q14449 540 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 NONOQ15233 471 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM260-204ENST00000553335 ARHGEF16Q5VV41 709 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 BRAPQ7Z569 592 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 DPP9Q86TI2 863 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 NOSTRINQ8IVI9 506 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 DNERQ8NFT8 737 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 RASGRP4Q8TDF6 673 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 SOCS4Q8WXH5 440 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 NUDT12Q9BQG2 462 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 TMEM260Q9NX78 707 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
TMEM260-204ENST00000553335 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
TMEM260-204ENST00000553335 LOC102724159A0A0B4J2E5 919 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 KIF28PB7ZC32 967 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 GNRH1P01148 92 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 ADORA2AP29274 412 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 PTGDRQ13258 359 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 PWP2Q15269 919 aaKnown RBP11.1□□□□□ -0.63
TMEM260-204ENST00000553335 PIK3AP1Q6ZUJ8 805 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 FERMT3Q86UX7 667 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
TMEM260-204ENST00000553335 TNFRSF25Q93038 417 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 TAAR1Q96RJ0 339 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 RMDN3Q96TC7 470 aa11.1□□□□□ -0.63
TMEM260-204ENST00000553335 NAP1L4Q99733 375 aaKnown RBP11.1□□□□□ -0.63
TMEM260-204ENST00000553335 KIAA1217Q5T5P2 1943 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 DNAJC25-GNG10A0A024R161 153 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 PGK2P07205 417 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 FECHP22830 423 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 RGS2P41220 211 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 USP11P51784 963 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 RESTQ13127 1097 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 PKP1Q13835 747 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 RILPL1Q5EBL4 403 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 MORN1Q5T089 497 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-204ENST00000553335 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 CD99L2Q8TCZ2 262 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 ZNF296Q8WUU4 475 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-204ENST00000553335 FOXD4L4Q8WXT5 416 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-204ENST00000553335 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 IWS1Q96ST2 819 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 PXMP2Q9NR77 195 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 COL20A1Q9P218 1284 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 DIS3Q9Y2L1 958 aaKnown RBP11.09□□□□□ -0.63
TMEM260-204ENST00000553335 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
TMEM260-204ENST00000553335 TCHHQ07283 1943 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 SOWAHBA6NEL2 793 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ASB14A6NK59 587 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ADAMTS3O15072 1205 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 EIF2AK2P19525 551 aaKnown RBP11.08□□□□□ -0.64
TMEM260-204ENST00000553335 CTGFP29279 349 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 CCND2P30279 289 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ZNF76P36508 570 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 SREBF1P36956 1147 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 TRAPPC10P48553 1259 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ALDH5A1P51649 535 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-204ENST00000553335 CNTN2Q02246 1040 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 PGM5Q15124 567 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 INF2Q27J81 1249 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ZNF792Q3KQV3 632 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 MYSM1Q5VVJ2 828 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 NEK8Q86SG6 692 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-204ENST00000553335 EPAS1Q99814 870 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 PDCD2LQ9BRP1 358 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 FRMPD4Q14CM0 1322 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 RPTORQ8N122 1335 aa11.08□□□□□ -0.64
TMEM260-204ENST00000553335 MCM3APO60318 1980 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 COBLO75128 1261 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 STAM2O75886 525 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 NR3C2P08235 984 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 CYP3A4P08684 503 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 HOXC6P09630 235 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms