RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 AGGF1Q8N302 714 aaeCLIP7.36□□□□□ -1.23
SCFD1-208ENST00000553278 DAGLBQ8NCG7 672 aa7.36□□□□□ -1.23
SCFD1-208ENST00000553278 GIMAP7Q8NHV1 300 aa7.36□□□□□ -1.23
SCFD1-208ENST00000553278 TTC17Q96AE7 1141 aa7.36□□□□□ -1.23
SCFD1-208ENST00000553278 EVI5LQ96CN4 794 aa7.36□□□□□ -1.23
SCFD1-208ENST00000553278 FCRL3Q96P31 734 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-208ENST00000553278 RRAGCQ9HB90 399 aa7.36□□□□□ -1.23
SCFD1-208ENST00000553278 PRDM5Q9NQX1 630 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-208ENST00000553278 ANO9A1A5B4 782 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 H7C1D1 291 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 ARNTLO00327 626 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 CBX7O95931 251 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 LCP1P13796 627 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 HSPA6P17066 643 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 PAMP19021 973 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 LPOP22079 712 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-208ENST00000553278 GRK2P25098 689 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 BMP8BP34820 402 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 KRT76Q01546 638 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 CRY1Q16526 586 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 COBLL1Q53SF7 1204 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 EPM2AIP1Q7L775 607 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-208ENST00000553278 C11orf96Q7Z7L8 435 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 CMTR2Q8IYT2 770 aaKnown RBP7.35□□□□□ -1.23
SCFD1-208ENST00000553278 CISD2Q8N5K1 135 aaKnown RBP7.35□□□□□ -1.23
SCFD1-208ENST00000553278 ZNF655Q8N720 491 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-208ENST00000553278 FBLIM1Q8WUP2 373 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 E2F7Q96AV8 911 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 Q96M66 194 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 LRGUKQ96M69 825 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 IPPKQ9H8X2 491 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 MAN1C1Q9NR34 630 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 CATSPERZQ9NTU4 200 aa7.35□□□□□ -1.23
SCFD1-208ENST00000553278 FRMPD2Q68DX3 1309 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-208ENST00000553278 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 CCDC189A1A4V9 331 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 KLHL33A6NCF5 533 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 XPOTO43592 962 aaKnown RBP7.34□□□□□ -1.23
SCFD1-208ENST00000553278 MYO1BO43795 1136 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 PPFIA4O75335 1185 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 NEK3P51956 506 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 CDK5R2Q13319 367 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 SAFBQ15424 915 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCFD1-208ENST00000553278 EFCAB2Q5VUJ9 269 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 SLC16A10Q8TF71 515 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 EZH1Q92800 747 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-208ENST00000553278 MMP19Q99542 508 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 SLC12A9Q9BXP2 914 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 HDAC8Q9BY41 377 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 AKTIPQ9H8T0 292 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 ATG3Q9NT62 314 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 H2AFY2Q9P0M6 372 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-208ENST00000553278 TAGLN3Q9UI15 199 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 INTUQ9ULD6 942 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 PCDHA2Q9Y5H9 948 aa7.34□□□□□ -1.23
SCFD1-208ENST00000553278 TRIM75PA6NK02 468 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 DYNC1LI2O43237 492 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-208ENST00000553278 VAV1P15498 845 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 GLB1P16278 677 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 RXRBP28702 533 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 GRK3P35626 688 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 PDE6BP35913 854 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 LRRC32Q14392 662 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 GRM3Q14832 879 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 ZNF174Q15697 407 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 GRAMD1BQ3KR37 738 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 OTOP1Q7RTM1 612 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 RASSF3Q86WH2 238 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 SPICE1Q8N0Z3 855 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 PIWIL2Q8TC59 973 aaKnown RBP7.33□□□□□ -1.24
SCFD1-208ENST00000553278 PNISRQ8TF01 805 aaKnown RBP7.33□□□□□ -1.24
SCFD1-208ENST00000553278 TRIM11Q96F44 468 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 DUSP23Q9BVJ7 150 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 NMRK2Q9NPI5 230 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 ANLNQ9NQW6 1124 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
SCFD1-208ENST00000553278 NOC2LQ9Y3T9 749 aaKnown RBP7.33□□□□□ -1.24
SCFD1-208ENST00000553278 GOLGA8AA7E2F4 631 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 GOLGA8BA8MQT2 603 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 PIK3R2O00459 728 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 TGM5O43548 720 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 ASGR2P07307 311 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 CELA2BP08218 269 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-208ENST00000553278 GSTM1P09488 218 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 LSP1P33241 339 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 SCAND1P57086 179 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
SCFD1-208ENST00000553278 ODF1Q14990 250 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 CLUL1Q15846 466 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 PRRT3Q5FWE3 981 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 GPR158Q5T848 1215 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 SEZ6L2Q6UXD5 910 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 PPM1EQ8WY54 764 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 TCTN2Q96GX1 697 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 CHAMP1Q96JM3 812 aa7.32□□□□□ -1.24
SCFD1-208ENST00000553278 BOCQ9BWV1 1114 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms